Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2148 ATGATAGGATCGTTTATTACCCGGGCACTTGTAATGGCTTTTGGCTATGCCTACCCAGCCTATGAATGCTATAAAGCAGTTGAGAAGAATAAACCAGAAATTGAGCAACTTCGCTTTTGGTGCCAATATTGGATTTTGGTCGCTCTTTTGACAGTTTTTGAGAGAATTGGTGATACTTTTATATCATGGTACAACATACATCCACTGCTTTCAGTTGAACAAATAAGGAAACTGTTTTGCTTTCGTATTTTGTTCTTGTCTTTAGAGTGTTCTTCTTGTAGGGTCCCAATGTACAGTGAAGCTAAGTTGGCGTTTTTCATATACCTGTGGTACCCTAAAACAAAGGGGACAACATATGTATATGATTCCTTCTTTAGACCATATGTTGCAAAGCATGAGTCAGAAATCGATCGCAACTTGTCAGAACTAAAGACAAGGGCTGGAGATGTAGCAGTTTTGTATTGGCAAAGAGCTGCTAGTTACGGCCAGACTAGAATAGTTGACATTTTGCAGTATGTTGCTGCGCAATCAACGCCAGCACCTCCCCCTGCTCAGCAACGACCAGGTGCAAGGGTCCGTCAAACTGCACCAGCTAATCATCAACCAGCTGCTGCAACAGAAATACAGGCTGAGGATCCTCCTTCTCCTACTTCCCGATCATCTTTAAGTCAGCAACAGAAGGAAGTAGCAGAGATGAGTTCTTCACAAGTGCCTAAAGCCGTTTTATCTGCAGCAGGCATAAGTACCCAGAATCCTACGCCCCAGTTGATCAACCAATCAGCAGCACCTGCAGAGACAGAGCCAATGCAGATTAATGCAGCAAATGAAAGTGAGAACCCCTCTACAGAAGAGACAGTAATGGAAGAAAGCATTAGGGTTACACGTGGCAGATTGAGAAAAAATCGATCAACTGCAATGCCTTAA 924 0.4307 MIGSFITRALVMAFGYAYPAYECYKAVEKNKPEIEQLRFWCQYWILVALLTVFERIGDTFISWYNIHPLLSVEQIRKLFCFRILFLSLECSSCRVPMYSEAKLAFFIYLWYPKTKGTTYVYDSFFRPYVAKHESEIDRNLSELKTRAGDVAVLYWQRAASYGQTRIVDILQYVAAQSTPAPPPAQQRPGARVRQTAPANHQPAAATEIQAEDPPSPTSRSSLSQQQKEVAEMSSSQVPKAVLSAAGISTQNPTPQLINQSAAPAETEPMQINAANESENPSTEETVMEESIRVTRGRLRKNRSTAMP* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2148 307 MobiDBLite consensus disorder prediction 178 307 - -
Amo17g2148 307 Pfam TB2/DP1, HVA22 family 94 128 IPR004345 -
Amo17g2148 307 Pfam TB2/DP1, HVA22 family 19 64 IPR004345 -
Amo17g2148 307 MobiDBLite consensus disorder prediction 211 287 - -
Amo17g2148 307 PANTHER HVA22-LIKE PROTEIN 6 66 - -
Amo17g2148 307 PANTHER HVA22-LIKE PROTEINS 6 66 IPR004345 -
Amo17g2148 307 PANTHER HVA22-LIKE PROTEINS 95 307 IPR004345 -
Amo17g2148 307 PANTHER HVA22-LIKE PROTEIN 95 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2148 Amo-Chr17 110934890 110937510 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0878 06 11990295 11993461 Amo17g2148 17 110934890 110937510 PCT
Amo17g2148 17 110934890 110937510 Amo06g0878 06 11990295 11993461 PCT