Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3986 ATGGAGTTTGGAGCTGCGACGGCAACTTTACCGAAGAAGCTATCGAGCGGTTACGGTGTAGCTGGAAGATCGGCCTACGACGGCGTTTTCACAGCTCCGGTAAAGCTCAGAGCTCCTAGTTTCTCTACTCGATTCGATGATTACCGTGAGATTTTCGGTGCCGGAGGTGGAGGAGGAGGATCGCTAGGTTCTTCTATTCCGATTCTCGAGCTTCCGGAGCTCAACGAAGAGAGGAGCAAAATCAACGAGGTTCGGCGCTCGCAGCTCGATTACTCTGCAGTCTTCGGCGGGTTCCGGAACCTGGACGGTGCTGTGCGTTTTGACGAGCTGGCAGCTGAGCCTAGGAAGAAGAAGCAGCAGGATAGCTTCGCCAGTGGAGCATCAACGCGGAGCAAAACCAATAGAGATGATCAATCTTACAAGGGAGACACTACTAATTATTCGAAGGAAATTCCAGCGGTATCACGGTCATCAAATGATGGCAAAATGATCAATATGTCATATCATAAAGTTAACCAGGGAAGTGAAGATGGAACGAAGGGGACAACTCATATTGCACATCCTATCCCTGCCTATACTTGTTTGGTTGAAGAAGTCAATCCAGTGAAGATAAACAGAGCTAATAAGTCCACACCAGCTGCACAGGATGCTTATTCCAGTAATCATCATTATAATGAAGGGACAAAGGAAGTTGGATATCGAACTGGTGCTTCATCTGATATTGCCAAGAAACAGTCCTCCAACAATGGAGTAAAAGTTAAAAATAGATCCAGTTCTGTTGATCTTTTTTTTTATGCATGTGAGACTAGCAGTGGAAGTAATGGAGCACATCGCATCAAAGTTCCTCCATCAGACCATATCTCAGGCGATAGTAGCAACCTTGATGCTATGAGATCAGCAGCAACCAAATGCCAGACATCTAAAAGTGACTCGCCTACAGGTGCTTCCCGTGCTGATTCACCATCATACCTGGATGATTTGGTAGACTCAAATTCTGAGGCTGCCGCTTCTGTAGCTGCTTTACGAAAGGCAATAGAAGAGGCTCAATTAAGATTGAAGGTCGCAAAAGAGTCATTGAGAAGAAAGAAAGGTTTTCCTGATCGTGTGAAGCGGAAGTCTAATATTGACCTTAAAGCCAATGTGAAAAAGGAGGCTGAAGTCCAATATAAAACAATGAAAATGGAAGAGATTAGGATGAGGCAAACATTTGGAGAAACAGATGCTTTGCCACAAGTTTCTTCTGAGGTAGGAAGGCCAATGAGGAAAGAGCGAGTAAGATCAGATGCTGGGGCTAAAGAAATGTTTGTTTCTGCGCATGAAGCTCAGAAGAAATTGCATTCAACTAAAACAAAACGTTTGGAAGAGGTCGAGCACAAAGAAGCTGATCATAATGCAAAGGTTGTTGAGCCTAAAGAGGCAGAAATTAGTAAGAAATTGCCGCATAACAAGAACACAGATCATGACTATGAGAAGCCAGAAGAGTCTGGCCATACAATTGAAGTGGTTAAGGGATATAGGGAACAAGAAAAGGTCCGGGTAGGTGATGAAGCATGTGCAGGTGAGGAACTTGCCTGTGAAACCAGGCATAGTAATCAACTAAAAATAGCTGCAGCTAATCGAGCAAGCCTACACAAAGAACATGTCAATGAAACTAAACATAGGTGTCAAGAAGTTATAGATGAAACAAAGCTGGTTCAAGTGGCATTTGATAGTGGAGAGCTCCACAAGAAATTAAAGGTAAATGAAGATGGTGAAGCTGATAACATGGTTACACCAGTTCATGATCCAGAGGACCTCGAATGCAACTTGGATGAGCAGGGGTTAATAACGAGAAATGAAAAACAAGTTGCTTTCAAGCCTGATGATGATGGAAAAATGGAAGAAGCATTCCCTGAGGTGGAAGAATGTAAACAAAATGTGAGAGCTGTTGAGCAGCTGAGTGAGATTGAGAAAGCCATCGAGGAGAATGCTGAATTGTCCGATGAGCAGGAGGAGTTGTTTTGGCAGAAAGACAATACAATAGCATTCAGTCCTCATGTTTCATACTTGGAAAGTGTGGTAGGAGACATACAGAACTCAGCATGTTTAGAGGACAGAAAGAATATGGACGAAGCTGGATTTTTGGAAAAAAGTATAGACACGGAAGATTCTTGTCAAAGACAAGGCACCGAGAATAATTGCAGCAACATTATTGTGCAGGAAATACAGGAGGAGATTGTGGATAATGTTCTTGATGAGGAAGAAATTTTTGAAAGAGTTTCAAAGAATAATGATTTAGATGAAGAAGAAAGGGTTCAAGACACCATAACAAGGGAGGATGAACTTGAAGGAGGGTTTATTCTGGTGGAAGAAACAGAGAGGGAAATGGAAGATAACAAGGAGTCGGTGGACATAACTGGAGTGGCTCAGATTGATCCTAACTACATGGAGACAAAAGCAAAGGAAGCTCGAGCTGGCAAGTCAACAGAAACTAGTTCTAGCAATGAGCTCAATGAAACTGAGAAGTTAAACGATATTCAGGTAGCTGATACAATTATTGAAAACGATGAAGCTTTCAAAGTAACTCCTGTGGTTTATCCATATGATGTGCAAGATGATATAATGGTTGCGCACGATGCTTCATTCCAACAAGATAAAGATGAAGAACCAGAATCAGTTAAGGCAAGAAGCAGTTCCTTGGAAGAACATGCAGCCGAGACTTCTGTCTCCAATCAAGATGTCCTTGAACTCAATGAAGGAGTAACTAAAATGCAAGGTGCAAGTGCAACAGTCATCTGCGAAGGAGCTGATACAAATATTGGTGAAACTGACGTGAAGTGTAGGCAAAATGATGATAAATGTTTGGAATCTACAGAAAATGACTGCAATCTGGCATCACATGATGAAGAAACAACTGCTGAGCCTGTAGAATTCTGCATTGACACAAAGGAGGCTAAGGTTACATCAGATGAAGAGGTACATGAGAATCGATCTAAGTTCTCTGATGAGGAAAATTTTTTTGACTATACTGAAGTGTGTGAAATACCTACTATGTCTGAATTGAAATCAAGCGGAGAAGAGGAGGTCGAAACAATTCAGAGTAGTCCACAGGAGATCCATCAAGCACCTGTGACAATGGAAGCAGAAGAAACCAAAGCTAATCCGCAGAAGCTAGAGCTGGAAAAGGAAGACCTCAAGAAAATTGATGAAGGAAAGGAGAGAGAAAGGGTAAGACGAAGAGAAAGAGAAAAGGAGAAATTAGCTGTAGAAAGAGCAATTCGTGAAGCTCGTGAAAGGGCATTTGCTGATGCCAGAGAGAGGGCTGCTCTGGAGAGAGCTGCTGCTGAAGCGCGGAAAAACATCGATGTGCGAGAAAGGCCGGGAAAAACTACTGGTCAAGCAAATGAGAAGACACTAGCCGAGAAGGCCGCTATGGAAGTGAAACTTAAAGCTGAACGTGCTGCTGTGGAGAGAGCAACTGCAGAGGCACGTGCACGTGCCCTAGAAAGGGCACTATCTGAGAAGGCTGCCTCTGAAGCAAGAAATAAACATGACAAGTCAGACCAGTATTCTGGTGCTTCCAGAGATAATGGAGCGAAACAAAACTTCCAATCAAAATCTTTCAGCTATGGTGTTCGAGATTCTATTGATTTATATGATGGAGCTAGTGGCGATTCTGCTCAAAGATGTAAAGCTAGGTCTGAGAGGCACCAGAGAATAGGGGATCGTGTGGCAAAGGCTCTTGCGGAAAAAAATATGCGTGATCGTCTTGTTCAGAAGGAGCAAGAGGAGAGAAATAGGATAGCAGAAGCTCTAGATGCTGATGTTAAAAGGTGGTCCAGTGGGAAGACAGGAAACTTGAGGGCATTGCTTTCAACATTACAATATATCCTTGGGCCCGAGAGTGGCTGGCAACCAATTCCTTTAACAGATATAGTAGCCACCAGCGCTGTAAAGAAAGCTTATCGCAAAGCAACTCTTTTCGTGCATCCTGACAAGCTGCAGCAGCGGGGAGCAAGTATTCAACAGAAGTACATTTGTGAGAAGGTTTTTGATCTTCTAAAGGAATCTTGGAACAGATTCAACATGGAAGAACGATAG 4080 0.4311 MEFGAATATLPKKLSSGYGVAGRSAYDGVFTAPVKLRAPSFSTRFDDYREIFGAGGGGGGSLGSSIPILELPELNEERSKINEVRRSQLDYSAVFGGFRNLDGAVRFDELAAEPRKKKQQDSFASGASTRSKTNRDDQSYKGDTTNYSKEIPAVSRSSNDGKMINMSYHKVNQGSEDGTKGTTHIAHPIPAYTCLVEEVNPVKINRANKSTPAAQDAYSSNHHYNEGTKEVGYRTGASSDIAKKQSSNNGVKVKNRSSSVDLFFYACETSSGSNGAHRIKVPPSDHISGDSSNLDAMRSAATKCQTSKSDSPTGASRADSPSYLDDLVDSNSEAAASVAALRKAIEEAQLRLKVAKESLRRKKGFPDRVKRKSNIDLKANVKKEAEVQYKTMKMEEIRMRQTFGETDALPQVSSEVGRPMRKERVRSDAGAKEMFVSAHEAQKKLHSTKTKRLEEVEHKEADHNAKVVEPKEAEISKKLPHNKNTDHDYEKPEESGHTIEVVKGYREQEKVRVGDEACAGEELACETRHSNQLKIAAANRASLHKEHVNETKHRCQEVIDETKLVQVAFDSGELHKKLKVNEDGEADNMVTPVHDPEDLECNLDEQGLITRNEKQVAFKPDDDGKMEEAFPEVEECKQNVRAVEQLSEIEKAIEENAELSDEQEELFWQKDNTIAFSPHVSYLESVVGDIQNSACLEDRKNMDEAGFLEKSIDTEDSCQRQGTENNCSNIIVQEIQEEIVDNVLDEEEIFERVSKNNDLDEEERVQDTITREDELEGGFILVEETEREMEDNKESVDITGVAQIDPNYMETKAKEARAGKSTETSSSNELNETEKLNDIQVADTIIENDEAFKVTPVVYPYDVQDDIMVAHDASFQQDKDEEPESVKARSSSLEEHAAETSVSNQDVLELNEGVTKMQGASATVICEGADTNIGETDVKCRQNDDKCLESTENDCNLASHDEETTAEPVEFCIDTKEAKVTSDEEVHENRSKFSDEENFFDYTEVCEIPTMSELKSSGEEEVETIQSSPQEIHQAPVTMEAEETKANPQKLELEKEDLKKIDEGKERERVRRREREKEKLAVERAIREARERAFADARERAALERAAAEARKNIDVRERPGKTTGQANEKTLAEKAAMEVKLKAERAAVERATAEARARALERALSEKAASEARNKHDKSDQYSGASRDNGAKQNFQSKSFSYGVRDSIDLYDGASGDSAQRCKARSERHQRIGDRVAKALAEKNMRDRLVQKEQEERNRIAEALDADVKRWSSGKTGNLRALLSTLQYILGPESGWQPIPLTDIVATSAVKKAYRKATLFVHPDKLQQRGASIQQKYICEKVFDLLKESWNRFNMEER* 1360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3986 1359 Gene3D DnaJ domain 1231 1359 IPR036869 -
Amo16g3986 1359 SUPERFAMILY Chaperone J-domain 1220 1355 IPR036869 -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 1011 1058 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 271 325 - -
Amo16g3986 1359 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 532 - -
Amo16g3986 1359 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 532 1359 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 1147 1184 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 874 894 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 401 496 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 874 904 - -
Amo16g3986 1359 PANTHER AUXILIN-LIKE PROTEIN 532 1359 - -
Amo16g3986 1359 PANTHER AUXILIN-LIKE PROTEIN 1 532 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 810 835 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 144 161 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 112 161 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 820 835 - -
Amo16g3986 1359 Coils Coil 1135 1164 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 1147 1199 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 1185 1199 - -
Amo16g3986 1359 Coils Coil 331 358 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 1111 1132 - -
Amo16g3986 1359 Coils Coil 642 669 - -
Amo16g3986 1359 Coils Coil 1072 1092 - -
Amo16g3986 1359 Coils Coil 1247 1267 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 437 496 - -
Amo16g3986 1359 MobiDBLite consensus disorder prediction 286 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3986 Amo-Chr16 151822517 151830666 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3986 16 151822517 151830666 Amo16g3986 16 151822517 151830666 ECH
Amo16g3986 16 151822517 151830666 Amo08g0010 08 441688 447064 PCT
Amo08g0010 08 441688 447064 Amo16g3986 16 151822517 151830666 PCT