Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3965 ATGAAGGTGAAGAAGTTAAAGAGTTCCTCTGTTTTGTCAGCTACAGTTGTTTTTACCGTTATGAACCTGTTCTTCTTCGTTGAGTTCAGTTCTGCTTTGAGTTCAAGCACTGAAAAGTTGAGTTCAAGAACCGAATGGTTTTCGTTGCTTCAACTTCGATCTTCATTGGGTATAAGAGCAAAAAACTGGCCAAGAAAAACAGAACCGTGCTGGAACTGGACCGGGATTCATTGCCAAAAGGGTTCAGTTATCGGAATCAACATTTCCGGTTTCAGAAGAACACATAAAGCTAGTCTTCACCCAAGTTTCTCAGTTGATGCACTTGCCAATTTTACCCGTTTAGCTTCCTTCAATGCTTCAGGTTTTGTGCTTAATGGTTCTATTCCTGAGTGGTTTGGTGACAAAAGTAATAACAACTACCTTGGTGCACTCCAGGTGCTTGATTTAAGTTCTTGCTCAATAACTGGCTCTATTCCTGAGTCAATTGGTGGTTTGATTTTGTTGAAGTCTGTGTTACTTTCTGGGAATAGCTTAACTGGTAGAATGCCTTCAGGTTTGGGAATGTTGTCTAATTTATCTGTGCTTGATCTCTCAGGAAATGAACTTTCTGGGTCTATTCCTGATTCATTGTTTTCACTTGGTAACCTCACACGTCTTAATCTTTCTTCCAATTACTTATCTGGGAATGTTCCGAATCAACTTAGTAACCTTTCAGGGCTTGAAACTTTGGACCTTTCCAACAATGCACTAACTGGTAATGTGCCTAGTGTCTTGTTTTCTCGCCTTTCGAAACTTCGAGTTCTCAATTTGAGTGGTAACTTTATTGATGGTGATCTTCCTGATACTTTGTGGTCATTACCGAGCTTGCGTTTCGTTGATGTGTCCAACAACAACCTTACCGGTCCTCTACCAAATTTTTTCGGTTCAAATACTAGTTCTACTGATGCCACATTCAATCTCTCAAACAACTTATTCTTTGGAACTCTAAATATTTCGGCTAAGAAGTTTAGAATGATTGATCTGTCCGGTAATTATTTGGAAGGCGAGGTGCAAGGTGTTAGTCTTAGTAATGTTAGTTTAGCTAGGAATTGCCTGGAGGATGTTCCAAATCAGAGGGATGTTAGTGTTTGTAGAGTGTTTTATGAGAAGAGAAATTTACCCTTTCCATCAAATTCGACAATGGAAAAATCTTCCAGAAAGAAACTGATATTCATACTGGTAGGTGTATTTGGTGGACTTGGCTTTATTTTGCTTCTGGCATTGGTCCTCGTACTGTTCTTAAAACTATGTGGCAATCATAAAAGCTTGGAAGTTCAAAGGGGAATTGAAAGTGGAGGGCCTGTTCCAGTAGGGGAGAGTCCTATGCCGCCTAAAGACCTTGCATTCGACATTGCTGTCGGGGAATCATTTACTTATGAGCAAATTCTCAAGTTGACTGGTAATTTTGCTGAAGCAAATATCATCAAGCATGGTCATTCTGGAGACCTCTTCTGGGGAGTAATGGAAAACGGAGCTACTGTCGTCATCAAAAAGGTAGATTTGAGTTTGTTCAAGAGAGAATCATATGTTGTGGAGTTGGAATTATTAAGCAAGGTTTCACATGCAAGATTGATCCCAATCTTGGGACATTGCTTGGAGAATGACAATGAGAAATGTATAGTTTACAAGTATATGCCAAATGGAGATTTGGCAAGTTCTTTGCAGAGAGTCACTGATGCAGATGGTAAATCGAAGTCCCTTGATTGGATCACAAGATTGAAAATCGCTACAGGAGCTGCCGAAGGCCTTGCTTATCTACACGATAGCAGTCCTCCCCTCGCTCACAGAGATGTTCAAGCTAGCAGCATACTTCTTGATGATAAATTTGAGGTGCGACTTGGAAGTTTGAGTGAGGTTACCACCCAAGGAGATGTCCATCCTGGTGTCATGAACAGGCTGTTCAGCAAGCCATCATCTTCTAATCAACCAAATTTTGGCACGTCATCAGTAACTTGGGCAGGTGATGTATATGGTTTTGGTAAGATTTTGCTCGAGCTTATTACCGGAGATACCGAGGTCAGTAAATCGGACGATGCCACCTCAAGAGAGTGGTTGGAGCAGACCTTGCCTTACATTAGCATAGATGATAAAGAAAGGATAAATAAGATTGTTGACCCTTCTTTGTTAGTAAATGAGGATCTACTTGAAGAAGTATGGGCTATAGCAATCGTGGCAAGATCATGCCTGAATCCTAGGCCTTCGAAACGTCCCCCTATGAGACACGTCCTCAGGGCGCTGGAAAATCCGTTGAAGGTTGTAAGAGAAGAAAGCGCAAGCTCGGTGAAGTTGCGAACAACTTCGTCTAGGAAGTCTTGGAGCACTGGATTGTTTGGTAGCTGGAGACAGAGCTCATCAGATAGTGCTACTGCAACAAACAAAGATAGTTCAAGTGGGACTAAACAATCAGGGAAAGTAAGTTCCCAAGGAAGTGGTGTAATAATGGATCACTCATCTTCCAATAAAAGATCATCCAAATCCAATGAAGTTTTCCCTGAACCATTGGAAACACAAGATGTGGAGATTGGTGGGGGAAGATGA 2577 0.4133 MKVKKLKSSSVLSATVVFTVMNLFFFVEFSSALSSSTEKLSSRTEWFSLLQLRSSLGIRAKNWPRKTEPCWNWTGIHCQKGSVIGINISGFRRTHKASLHPSFSVDALANFTRLASFNASGFVLNGSIPEWFGDKSNNNYLGALQVLDLSSCSITGSIPESIGGLILLKSVLLSGNSLTGRMPSGLGMLSNLSVLDLSGNELSGSIPDSLFSLGNLTRLNLSSNYLSGNVPNQLSNLSGLETLDLSNNALTGNVPSVLFSRLSKLRVLNLSGNFIDGDLPDTLWSLPSLRFVDVSNNNLTGPLPNFFGSNTSSTDATFNLSNNLFFGTLNISAKKFRMIDLSGNYLEGEVQGVSLSNVSLARNCLEDVPNQRDVSVCRVFYEKRNLPFPSNSTMEKSSRKKLIFILVGVFGGLGFILLLALVLVLFLKLCGNHKSLEVQRGIESGGPVPVGESPMPPKDLAFDIAVGESFTYEQILKLTGNFAEANIIKHGHSGDLFWGVMENGATVVIKKVDLSLFKRESYVVELELLSKVSHARLIPILGHCLENDNEKCIVYKYMPNGDLASSLQRVTDADGKSKSLDWITRLKIATGAAEGLAYLHDSSPPLAHRDVQASSILLDDKFEVRLGSLSEVTTQGDVHPGVMNRLFSKPSSSNQPNFGTSSVTWAGDVYGFGKILLELITGDTEVSKSDDATSREWLEQTLPYISIDDKERINKIVDPSLLVNEDLLEEVWAIAIVARSCLNPRPSKRPPMRHVLRALENPLKVVREESASSVKLRTTSSRKSWSTGLFGSWRQSSSDSATATNKDSSSGTKQSGKVSSQGSGVIMDHSSSNKRSSKSNEVFPEPLETQDVEIGGGR* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3965 858 Gene3D Phosphorylase Kinase; domain 1 460 557 - -
Amo16g3965 858 PRINTS Leucine-rich repeat signature 192 205 - -
Amo16g3965 858 PRINTS Leucine-rich repeat signature 237 250 - -
Amo16g3965 858 MobiDBLite consensus disorder prediction 785 858 - -
Amo16g3965 858 Pfam Leucine rich repeat 239 299 IPR001611 GO:0005515
Amo16g3965 858 SUPERFAMILY Protein kinase-like (PK-like) 464 759 IPR011009 -
Amo16g3965 858 Gene3D Transferase(Phosphotransferase) domain 1 558 782 - -
Amo16g3965 858 MobiDBLite consensus disorder prediction 785 844 - -
Amo16g3965 858 Pfam Leucine Rich Repeat 144 165 IPR001611 GO:0005515
Amo16g3965 858 Pfam Leucine Rich Repeat 191 212 IPR001611 GO:0005515
Amo16g3965 858 ProSiteProfiles Protein kinase domain profile. 482 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3965 858 Pfam Protein tyrosine and serine/threonine kinase 488 758 IPR001245 GO:0004672|GO:0006468
Amo16g3965 858 ProSiteProfiles Leucine-rich repeat profile. 191 213 IPR001611 GO:0005515
Amo16g3965 858 Gene3D Ribonuclease Inhibitor 209 387 IPR032675 -
Amo16g3965 858 SUPERFAMILY RNI-like 105 366 - -
Amo16g3965 858 PANTHER OS01G0253100 PROTEIN 14 842 IPR045271 GO:0004714|GO:0006468
Amo16g3965 858 PANTHER OS03G0724300 PROTEIN 14 842 - -
Amo16g3965 858 SMART LRR_typ_2 237 261 IPR003591 -
Amo16g3965 858 SMART LRR_typ_2 286 309 IPR003591 -
Amo16g3965 858 SMART LRR_typ_2 189 213 IPR003591 -
Amo16g3965 858 SMART LRR_typ_2 262 285 IPR003591 -
Amo16g3965 858 SMART LRR_typ_2 141 165 IPR003591 -
Amo16g3965 858 Gene3D Ribonuclease Inhibitor 42 208 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3965 Amo-Chr16 151611231 151615938 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Amo16g3965 PK_Tyr_Ser-Thr 1.2e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3965 16 151611231 151615938 Amo16g3965 16 151611231 151615938 ECH