Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3959 ATGGCAACAAAGCTTGATCCATTTACTCTCCTTCTTTCTCTCTTCTTTGCATTCAACCTCGCAAGTGGTGAATCATTCATAGGGGTTAACTATGGACAGGTGGCTGATAACCTTCCACCGCCGTCAACCACCGCCAAGCTGCTCCAATCCACCGCCATCGGAAAAGTTCGCTTGTACGGTTCCGACCCTGCTATTATCAAAGCACTCGCCAACACTGGAATTGGAATCGTAATTGGAGCAGCAAATGGGGACATTCCATCACTTGCATCGGATCCAAACTATGCCAAAAACTGGGTGAGCTCCAACGTTGTACCTTTCTACCCAGCCAGCAACATCATCCTCATAACGGTTGGTAACGAGATTATAACCTCAAACGATCCAAATCTCATGAACCAGATGCTCCCCGCAATTCAAAATGTCCAAAATGCCCTTAATGCCGCCAATTTAGGAGGCAAGATTAAGGTGTCAACGGTCCATTCAATGGCGGTCTTGAAGGACTCGGAGCCGCCGTCTGCCGGGAGGTTCCACCCGGAATACTCCACCGTTTTACAAGGATTGTTGTCGTTTAACAATGCGACGGGGTCGCCGTTTGCCATCAACCCTTACCCTTATTTTGCTTATAGAGATGATCCTGGGAGGCAAGATAACTTGGCCTTTTGCCTCTTTCAACCCAATGCTGGAAGGCTTGATCCCAACACCAATATCAAATACATGAACATGTTTGATGCTCAGGTTGATGCTGTCCGCTCTGCATTGAACTCAATGGGGTTTAAGGATGTTGAGATTGTGGTTGCGGAGACAGGTTGGCCATACAAAGGAGACAGCAGTGAGGTTGGTCCGAGTCTTGAAAACGCCAAGGCTTACAACGGCAACCTCATCGCGCACCTTAGATCCATGGTTGGGACACCATTGATGCCAGGGAAATCGGTTGACACTTACATCTTCGCATTGTATGATGAGGATTTGAAGCCAGGACCAACTTCTGAGAGATCTTTTGGTCTATTCAACCCTGATCAATCCATGATCTATGATGCTGGTCTCTCCAAACAGCAGACACAACAGAATAGCACAAGCCCTGTTGTAGCACCGACTACTCCGGATATGTCTAAGTCTCCGGCGACTCCACGGCCGCCAACAACACAAAATAAATCAACATGGTGTGTGCCGAAATCCGGTGTAACGGATGTGCAGCTACAAGCAAACTTGGACTATGCTTGTGGTCAAGGTATTGATTGTACTCCAATACAACCTGGTGGACCTTGTTTTGAACCAAATACACTTTCAAACCATGCTGCATTTGCTATGAATCTCTTCTATCAATCTGCTGGAAGGAGTCCATTGACTTGTGATTTCTCGCAGACAGCTATACTGTCCACGAATAATCCAAGTTACAATAATTGTGTCTATGTTGGAAGGAATGCCTAA 1425 0.4674 MATKLDPFTLLLSLFFAFNLASGESFIGVNYGQVADNLPPPSTTAKLLQSTAIGKVRLYGSDPAIIKALANTGIGIVIGAANGDIPSLASDPNYAKNWVSSNVVPFYPASNIILITVGNEIITSNDPNLMNQMLPAIQNVQNALNAANLGGKIKVSTVHSMAVLKDSEPPSAGRFHPEYSTVLQGLLSFNNATGSPFAINPYPYFAYRDDPGRQDNLAFCLFQPNAGRLDPNTNIKYMNMFDAQVDAVRSALNSMGFKDVEIVVAETGWPYKGDSSEVGPSLENAKAYNGNLIAHLRSMVGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFNPDQSMIYDAGLSKQQTQQNSTSPVVAPTTPDMSKSPATPRPPTTQNKSTWCVPKSGVTDVQLQANLDYACGQGIDCTPIQPGGPCFEPNTLSNHAAFAMNLFYQSAGRSPLTCDFSQTAILSTNNPSYNNCVYVGRNA* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3959 474 Pfam Glycosyl hydrolases family 17 27 344 IPR000490 GO:0004553|GO:0005975
Amo16g3959 474 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
Amo16g3959 474 Gene3D Glycosidases 26 356 - -
Amo16g3959 474 PANTHER GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 10 460 - -
Amo16g3959 474 MobiDBLite consensus disorder prediction 348 386 - -
Amo16g3959 474 Gene3D - 379 472 - -
Amo16g3959 474 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 10 460 IPR044965 GO:0004553|GO:0005975
Amo16g3959 474 SMART X8_cls 385 469 IPR012946 -
Amo16g3959 474 Pfam X8 domain 385 455 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3959 Amo-Chr16 151513956 151518808 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3959 16 151513956 151518808 Amo16g3959 16 151513956 151518808 ECH