Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3941 ATGTTTCCGTGTAGCTCACGCGCTTTGTTTTCTAGGTCTCGCTGTGTGCTTCGATTCGACGTCGTCGTTCTCGCTATTGTATTGATATTGTTTTGGTTGGAAGCTGGTACTGCAAAACCTGTAGAGCACCGACTTCAGTGGGGAAGCTCAGAAGGGAGGACTGAGAATGTTGCCTCGCACTCTTGCATACACGACCAGATAATTGAACAAAGAAAGCGACCTGGTCGCAAGGTGTATTCGGTTACCCCACAGGTGTACGAGCCTGGTGTCTTGAAACCCCTTCAGCACAGAGGCAGGGCATTGCTTGGTGTATCATCATCAGTGGAATCTCAGAAGGATGCAAAACAACCTATAAGGATTTATCTAAATTATGACGCTGTGGGCCACTCGTCTGACAGGGATTGTCGGAAACTTGGTGATATTGTTAAACTTGGGGAGCCTCCTTTGGCTTCGCTGCTAGGTTCGCCTTTGTGTAATCCTCATGCTGATCCTCCAATCCTTGGTGATTGTTGGCATAACTGCACTTCTGAAGATATATCTGGAGAGGACAAAAAGCATCGACTTCGTAAGGCATTAGGGCAGACAGCTGACTGGTTTAGGAGAGCATTGGCTGTTGAGCCAGTCAAGGGGAACTTGCGATTAAGTGGATATTCTGCATGTGGACAAGATGGAGGTGTGCAGCTTCCACGTGAATATATCGAGGAGGGTGTCTCCAATGCCGACTTAGTTCTTTTGGTGACTACGAGACCCACAACTGGGAATACACTTGCTTGGGCAGTTGCATGTGAACGGGATCAATGGGGACGTGCTATAGCTGGACATGTTAATGTTGCTCCTCGTCATTTGACAGCTGAGGCAGAGACTTTGCTTTCTGCTACTCTGATACACGAGGTTATGCATGTTCTTGGTTTTGATCCCCATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGGCGCCGTAGTCAGGTTACCGAACAAATTATGGATGAAAAGATTGGGCGGATGGTAACACGTGTGGTTCTTCCACGTGTTGTCATGCATTCACGACATCATTATGGGGCATTCTCAGGAAATTTTACTGGTTTAGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGATCTCATTGGGAGAAGAGGCTACTAATGAATGAGATTATGACTGGTTCTGTTGACACAAGATCTGTAGTTTCTAAAATGACATTGGCTCTCTTGGAAGATAGCGGATGGTATAAAGCTAATTATAGCATGGCTGACCGGCTTGATTGGGGTCGCAACCAAGGTAGCGAATTTGTTACCTCCCCTTGCAATCTTTGGAAGGGGGCCTATCGTTGCAACACAACACAGTTCTCAGGTTGTACATATAACAGAGAGGCAGAAGGTTACTGCCCGATTCTAACATATAGTGGAGATCTCCCTCTGTGGGCTCAGTATTTTCCACAAGCTAATAAAGGCGGCCAATCCTCATTAGCCGATTATTGCACTTATTTTGTTGCATACTCTGATGGATCATGTACAGACACTAACAGTGCTCGTGCACCTGATAGAATGCTTGGTGAAGTCCGAGGAAGTAACTCTAGGTGTATGGCCTCATCATTAGTGCGCACAGGATTTGTACGGGGTTCTACGACCCAGGGAAACGGTTGTTATCAGCATAGGTGTATTAATAATTCTTTGGAGGTTGCTGTTGATGGTATCTGGAAAGTGTGTCCTCGGGCTGGTGGACCCATTCAGTTTCCTGGCTTTAATGGTGAATTAATCTGCCCTGCATACCATGAGCTCTGTAACACAGCCCCAGTGGCTGTGTCTGGGCAATGTCCCAATGCGTGTAACTTCAATGGAGATTGTGTTGAAGGACGCTGCAATTGCTTTCTTGGATTTCATGGTCATGATTGCAGTAAACATTCCTGCCCGAGCAACTGCAATGGTAATGGCATCTGTCTCTCAAACGGAATTTGTGAATGTAAAGCTGGCTACACTGGCATTGACTGTTCCACCGCGGTTTGTGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAGTTCCGATGTTCGGACTATGCGGGATATACTTGCCAGAACAGCTCAATGCTCCTCTCCAGCCTTTCAGTTTGCAAGGAAGTACTGGGAAAGGGTATTTCTGGGCAGCATTGTGCACCTAGTGAACCTAGTATTCTGCAGCAGCTAGAAGAAGTGGTTGTCATGCCCAACTACCACCGACTATTTCCTGGTGGTGCAAGGAAATTATTTAATATATTTGGGAGTTCCTACTGTGACGAGGCGGCTAAACGACTTGCATGCTGGATTTCCATCCAAAAGTGCGACGGTGATGGAGACAACAGGCTTCGAGTATGTCATTCTGCATGCCAGTCATACAATCTAGCATGTGGAGCATCACTGGACTGCACTGACCAAACCCTATTCAGCAGCAAAAAGGAGGGTGAGGGTCAGTGCACTGGTTCCGGTGAGTTGAAACTATCATGGTTTAATCGCGTCCGGAGTAGTTTTACCTTAAGAGATAGTTCCTCCAAAGGAATATCTGTAAGAGATAGTTAG 2571 0.466 MFPCSSRALFSRSRCVLRFDVVVLAIVLILFWLEAGTAKPVEHRLQWGSSEGRTENVASHSCIHDQIIEQRKRPGRKVYSVTPQVYEPGVLKPLQHRGRALLGVSSSVESQKDAKQPIRIYLNYDAVGHSSDRDCRKLGDIVKLGEPPLASLLGSPLCNPHADPPILGDCWHNCTSEDISGEDKKHRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPREYIEEGVSNADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRSQVTEQIMDEKIGRMVTRVVLPRVVMHSRHHYGAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGSEFVTSPCNLWKGAYRCNTTQFSGCTYNREAEGYCPILTYSGDLPLWAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSTTQGNGCYQHRCINNSLEVAVDGIWKVCPRAGGPIQFPGFNGELICPAYHELCNTAPVAVSGQCPNACNFNGDCVEGRCNCFLGFHGHDCSKHSCPSNCNGNGICLSNGICECKAGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKEVLGKGISGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDEAAKRLACWISIQKCDGDGDNRLRVCHSACQSYNLACGASLDCTDQTLFSSKKEGEGQCTGSGELKLSWFNRVRSSFTLRDSSSKGISVRDS* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3941 856 ProSitePatterns EGF-like domain signature 1. 653 664 IPR000742 -
Amo16g3941 856 Gene3D Leishmanolysin domain 4 500 595 - -
Amo16g3941 856 Gene3D Laminin 635 667 - -
Amo16g3941 856 Gene3D Laminin 605 634 - -
Amo16g3941 856 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 4 829 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Amo16g3941 856 SMART egf_5 605 633 IPR000742 -
Amo16g3941 856 SMART egf_5 636 665 IPR000742 -
Amo16g3941 856 Gene3D Leishmanolysin domain 3 439 498 - -
Amo16g3941 856 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 4 829 - -
Amo16g3941 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 246 275 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Amo16g3941 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 399 428 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Amo16g3941 856 Gene3D Leishmanolysin , domain 2 311 436 - -
Amo16g3941 856 ProSitePatterns EGF-like domain signature 2. 653 664 IPR000742 -
Amo16g3941 856 Gene3D - 110 301 - -
Amo16g3941 856 ProSiteProfiles EGF-like domain profile. 633 665 IPR000742 -
Amo16g3941 856 Pfam Leishmanolysin 172 597 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Amo16g3941 856 Pfam EGF-like domain 637 664 IPR013111 -
Amo16g3941 856 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 113 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3941 Amo-Chr16 151287191 151294437 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3941 16 151287191 151294437 Amo16g3941 16 151287191 151294437 ECH