Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3931 ATGAACTCTAATCCCAAAAAATCACAACCACCATTATCACCACTCTCATTACTAATTCTCACCCTCTCCTTGTTCTTATTATTGCTACCATGTACATCCTCAACAAACGCCAATTTCCAACACCAATTCAAAGAAGCACCTCAATTCTACAATTCCCCAAATTGCCCCTCCATTGAAGACAATAACTACATATGCTCTGATGAACTAGTTCATGTTGCAATGACACTAGACAAGACATACATACGAGGTTCCATGGCAGCAATCCTAAGTGTCCTTCAACACTCTTCATGTCCACAAAACATCTTCTTCCATTTTGTTTCTTCAACAAAATCCAACTCATCCTCACTCTTACACACCACACTCTCAAAATCATTCCCATACCTCAAATTCAAACTCTATGATTTCAGCGACGAATTAGTCTCTGGCCTGATTTCAACGTCAATTCGCTCCGCCCTCGATTGCCCTCTAAACTACGCAAGATCCTACCTCCCAACCATTCTCCCAACATGCGTGAAAAAGATAGTCTACCTCGACTCCGACCTCGTACTAGTCGATGAAATTACGAAACTAGCCTCCACCCCATTAAACAAGGATCAAGTTCTTGCAGCACCGGAATACTGCAATGCAAACTTCACAGCTTACTTCACTCCCACGTTTTGGTCCAACCCTTCGCTTTCGCTAACGTTTGCGAATCGAAAAGCTTGTTACTTCAACACTGGGGTGATGGTGATTGATCTTGAGAAATGGCGGGAAGGAGATTACACACGGAAGATAGAGGAATGGATGGAGCTTCAGAAGAGGATGAGAATCTACGAGCTTGGATCGTTGCCGCCATTTTTGCTGGTTTTCGCGGGGAAGATCGGAAGTGTGGATCATCGGTGGAACCAGCATGGGCTTGGTGGAGATAACTTTAGAGGTTTGTGTAGAGATCTTCATCCTGGGCCTGTGAGTTTGTTGCATTGGAGTGGGAAAGGGAAGCCATGGGTGAGACTTGATGCTAATAGACCTTGTCCTTTGGATACTCTTTGGGCACCTTATGATCTTTTGATCACTCCTTTTTCTTTGGATTCTTGA 1074 0.4385 MNSNPKKSQPPLSPLSLLILTLSLFLLLLPCTSSTNANFQHQFKEAPQFYNSPNCPSIEDNNYICSDELVHVAMTLDKTYIRGSMAAILSVLQHSSCPQNIFFHFVSSTKSNSSSLLHTTLSKSFPYLKFKLYDFSDELVSGLISTSIRSALDCPLNYARSYLPTILPTCVKKIVYLDSDLVLVDEITKLASTPLNKDQVLAAPEYCNANFTAYFTPTFWSNPSLSLTFANRKACYFNTGVMVIDLEKWREGDYTRKIEEWMELQKRMRIYELGSLPPFLLVFAGKIGSVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDTLWAPYDLLITPFSLDS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3931 357 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 71 337 IPR029044 -
Amo16g3931 357 Pfam Glycosyl transferase family 8 71 330 IPR002495 GO:0016757
Amo16g3931 357 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 1-RELATED 17 357 - -
Amo16g3931 357 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 17 357 - -
Amo16g3931 357 SUPERFAMILY Nucleotide-diphospho-sugar transferases 70 348 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3931 Amo-Chr16 151113623 151114854 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3931 16 151113623 151114854 Amo16g3931 16 151113623 151114854 ECH
Amo16g3931 16 151113623 151114854 Amo17g2284 17 116584249 116586079 PCT
Amo17g2284 17 116584249 116586079 Amo16g3931 16 151113623 151114854 PCT