Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3925 ATGCCTATGAACACCACCCCATTACTTGATAACAATAATGGAAACCATGGTATCATTAATGCTGAGAATGATGATGAAAGGCCATTTAATTTGGTTAAGAAATTTGGTTTTGAATCAAAGAAGTTATGGAAGTTAGCGGGGCCAGCAATAATCACAGCCTTGGCTCAGTTTTCACTTGGTGCACTCACTCAAACATTTGCTGGTTTGACCAGTGAGCTTGATCTTGCTGCTGTTTCTGTTGAAAACTCTGTTATTGCTGGCTTGGCTTTTGGAGTCATGTTGGGAATGGGGAGTGCATTGGAGACACTATGTGGGCAAGCATATGGTGCTGGTCAGATTAGAATGTTAGGAGTTTACATGCAAAGATCATGGATCATCTTGTTGACCACTGCCCTTATTTTGGTACCTATTTATGTTTGGTCTTCTCCCATCTTAAAGCTCATTGGAGAGACTGATGAAATCTCAGATGCTGCTGGAAATTTTGCTTTGTGGATGTTACCTCAATTGTTTGCTTATGCATTGAACTTCCCAATCCAAAAGTTCTTACAATCACAGAGGAAAGTTGCAGTGATGTTATGGATATCAATAATAGTGTTGGTGCTACACATATTTTTCAGTTGGCTCCTAATGTTTAAGTTGGATTGGGGCTTAACTGGAGCAGCTATTACCCTTAATTCATCATGGTGGCTAATTGTCATTTTGGAATTAATATACATTTTCGTCACAAAATCTGATGGTGCTTGGAGTGGATTCACATGGCTAGCATTTGAGGATTTGTATGGTTTTGTCAAACTTTCTTTGGCTTCTGCTGTCATGTTATGCTTGGAGCTTTGGTACTTGATGATATTGATGGTGATAACAGGGCGTTTGAAAAATCCTCTAATACCTGTTGATGCCATATCTATCTGTATGAACATAAATGGTTGGGATGCCATGATTGCAATTGGGTTCAATGCTGCAATAAGTGTGAGGGTATCAAATGAACTTGGAGGTGGTGATTTCAATGCAGCAAGATTTGCAGTGTGGGTGGTTTCCATAACATCAGTTTCCATAGGAGTTATAATTATGATTATAGTACTCACAACAAGGGACTATTTTCCATACTTGTTCACAACAAGTGTTGCTGTTGCAAAAGAAACAACTAAGCTTGCTTCCTTATTAGGTGTCACAGTGCTTCTAAACAGCCTTCAACCTGTCCTATCCGGTGTTGCTGTTGGAGCTGGGTGGCAAGCTCTTGTAGCATACATCAACATTGGTTGTTACTATATTGTTGGTTTACCAGCTGGGATACTTTTGGGATTCACATTTGGTTTTGGAGGTATTTGGTCAGGGATGATTGGAGGCATAGCTTTGCAAACCATAATCCTTATCATCGTCACATCAGTAACCAACTGGAGAAAAGAGGCTGATGTAGCTGAAAGTCGCGTGAAGAAGTGGGGAGGATCAACTGCTTATGAACAATGA 1464 0.401 MPMNTTPLLDNNNGNHGIINAENDDERPFNLVKKFGFESKKLWKLAGPAIITALAQFSLGALTQTFAGLTSELDLAAVSVENSVIAGLAFGVMLGMGSALETLCGQAYGAGQIRMLGVYMQRSWIILLTTALILVPIYVWSSPILKLIGETDEISDAAGNFALWMLPQLFAYALNFPIQKFLQSQRKVAVMLWISIIVLVLHIFFSWLLMFKLDWGLTGAAITLNSSWWLIVILELIYIFVTKSDGAWSGFTWLAFEDLYGFVKLSLASAVMLCLELWYLMILMVITGRLKNPLIPVDAISICMNINGWDAMIAIGFNAAISVRVSNELGGGDFNAARFAVWVVSITSVSIGVIIMIIVLTTRDYFPYLFTTSVAVAKETTKLASLLGVTVLLNSLQPVLSGVAVGAGWQALVAYINIGCYYIVGLPAGILLGFTFGFGGIWSGMIGGIALQTIILIIVTSVTNWRKEADVAESRVKKWGGSTAYEQ* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3925 487 MobiDBLite consensus disorder prediction 1 19 - -
Amo16g3925 487 Pfam MatE 269 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo16g3925 487 Pfam MatE 48 208 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo16g3925 487 MobiDBLite consensus disorder prediction 1 21 - -
Amo16g3925 487 CDD MATE_eukaryotic 38 469 IPR045069 GO:0042910|GO:1990961
Amo16g3925 487 TIGRFAM matE: MATE efflux family protein 48 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo16g3925 487 PANTHER PROTEIN DETOXIFICATION 33 24 473 - -
Amo16g3925 487 PANTHER MULTIDRUG RESISTANCE PROTEIN 24 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3925 Amo-Chr16 151053587 151059891 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3925 16 151053587 151059891 Amo16g3925 16 151053587 151059891 ECH