Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3917 ATGATGATGTTCAGAGAGGAAACAATTGGTTCGATTAGCGCGCGTCACAGCACCACCAGCACTGCTGGCACCAGAATTTCAGCATCGGTCAACAAAGTTCTGGTTGCAGTTAAAGCAGAGAAGATAATCTCCAATACGGCACTAGCTTGGGCTCTCACTCATGTTGTTCACTCCTCGGACTCCATCACGCTCCTTGCTGTTTATTCCGTCGAGAAATCTGGCAGAAGGTTCTGGAACTTTTCAAGGTTGCGTGGAGATTGTTCTAGCGGAGTAAGTGCTGGAAAGTTGCCGGAGAAAATTTCCGATATATCAGAATCTTGTGCTCAGATGGTGCTTCAGCTGCACAATCAAATTGAGGTTAGGGTGAAGATTAAGGTGGTAACTGGTACTCCAAGTGGTGCTGTAGCAGCTGAAGCCAGATGGAGTGGCTCCCATTGGGTCATACTGGACAAGAAGTTAAAGCAAGAGGTAAAGCATTGCATGGATGAACTCAACTGTAGCGTTGTGGTGATGAATGCCTCAAAACCAAAAGTTCTCAGGCTTAACTTAGCATGCTCTGATGAACTCCAAACTCCATTTTTCTCCTCTGCTTCTTCACCGGATATAGCAATTGGAAAGCTCAAAGGCCGCAGATTGAAGCATTCAACCCCAGTGAGTAGCCCTGAAGAACCAGCTACTTCTGCCACTAGAACCATCGGAGTTTACTCAGAGTCAAGTTCTGATTCAATGGCTTCTCTTTTCCAAGTCTATGAGCAAAATCCTCTGTATGAGGGTCAGGGACTGCACGACAAAAGAGCATACAAACCAATCAATGAGCCAAAAGAGTTCAACTTTGATTTGGAAAAGGATTTGGGGACACATTCAATCCCATATGCGTCAAGTGATGATAACAAGGATGTATTTTGGATTCCTCAGAACAGAGTTATCCAAAGAACCAAATCTCCAACTTCCAAAACACTACTTGAGAATTTTATGCACTGTGATCAGGAAATGAAAAGGACAACTAATGAACTTGGGTTTAAACAATCTCAAAGCAGAGTTTACGCTTCCAACATGGGCAACAGAGGTAATGCCACCATTCCTATGGGCAGAACTTCGTGTATACCTCCTCCCTTGTGCTCTCAATGTCAGAACAAAGCACCAGTTTTTGGAAAGCCTCCTAGACAGTTTTCTTACAAGGAGATAGAGGAAGCTACTGATATGTTCTCGCATGCAAATTTTCTAGCTGAAGGTGGATTTGGTGTTGTTCACAAGGGAATTCTCAGAGATGGCCAGGTTGTTGCTGTGAAACAGTTAAAGTTTGGAGGCTCTCAAGCTGATCTTGATTTCTGCAGGGAAGTTCGTGTTTTGAGCTGTGCACAACACAGAAATGTTGTGTTGTTGATAGGATTTTGTGTAGAGGCCAATTTGAGGATATTAGTCTATGAATACATATGCAATGGATCCTTGGACCTTTACTTACATGGAGATGGGAATACCCCCTTGGATTGGAACTCACGGTTAAAGATAGCGATTGGAGCTGCAAGAGGATTACGCTACCTTCATGAAGATTGCAGAGTTGGTTGCATAGTGCACAGAGATTTTCGACCCAGAAATATTCTCTTAACGCATGACTTTGAGCCTTTGGTGGCTGATTTCGGGCTTGCTAGATGGCACTCAGAATGGAATATAAATACTGAACAAGATCGAGTTGTAGGAACATCAGGGTATCTTGCACCTGAATATCTTGAAGCTGGAAATCTTACATATAAAGTAGATGTATATGCATTTGGCATTGTTTTACTAGAGTTAATAACAGGTCGAAGAATTAGTGAGTTGGAACAATTTAATGGTCACTCGTTTCTTTCTGAATGGTTTCATCCTATACGCATGTTAGAGGCAGATCATATATTGCAAAACGTTCGGTCTCTTAACCCATACTTGGGGTTTGAGACGTCATTGGAATTTAACTTTGAATTACAAGCCATGGCAAGAGCTGCTTCATTGTGTCTACGTCTGGATCCTGATGCCAGACCTCCAATGTCTAAGATCCTGAGAGTACTGGAAGGGGGTGATGCAGTTCGTCCTATTGGTTTAGACTTCAATTCAGTTGGTAATAGAAGTGGCCATTTAAGTGGTTTGAGTTCTCACACTCCACATAAAGTTACAATAAGTCATTCTCGTAGGCTATCACATTGA 2178 0.427 MMMFREETIGSISARHSTTSTAGTRISASVNKVLVAVKAEKIISNTALAWALTHVVHSSDSITLLAVYSVEKSGRRFWNFSRLRGDCSSGVSAGKLPEKISDISESCAQMVLQLHNQIEVRVKIKVVTGTPSGAVAAEARWSGSHWVILDKKLKQEVKHCMDELNCSVVVMNASKPKVLRLNLACSDELQTPFFSSASSPDIAIGKLKGRRLKHSTPVSSPEEPATSATRTIGVYSESSSDSMASLFQVYEQNPLYEGQGLHDKRAYKPINEPKEFNFDLEKDLGTHSIPYASSDDNKDVFWIPQNRVIQRTKSPTSKTLLENFMHCDQEMKRTTNELGFKQSQSRVYASNMGNRGNATIPMGRTSCIPPPLCSQCQNKAPVFGKPPRQFSYKEIEEATDMFSHANFLAEGGFGVVHKGILRDGQVVAVKQLKFGGSQADLDFCREVRVLSCAQHRNVVLLIGFCVEANLRILVYEYICNGSLDLYLHGDGNTPLDWNSRLKIAIGAARGLRYLHEDCRVGCIVHRDFRPRNILLTHDFEPLVADFGLARWHSEWNINTEQDRVVGTSGYLAPEYLEAGNLTYKVDVYAFGIVLLELITGRRISELEQFNGHSFLSEWFHPIRMLEADHILQNVRSLNPYLGFETSLEFNFELQAMARAASLCLRLDPDARPPMSKILRVLEGGDAVRPIGLDFNSVGNRSGHLSGLSSHTPHKVTISHSRRLSH* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3917 725 Gene3D Transferase(Phosphotransferase) domain 1 478 688 - -
Amo16g3917 725 ProSiteProfiles Protein kinase domain profile. 402 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3917 725 SUPERFAMILY Protein kinase-like (PK-like) 382 681 IPR011009 -
Amo16g3917 725 Gene3D Phosphorylase Kinase; domain 1 371 477 - -
Amo16g3917 725 PANTHER OS01G0253100 PROTEIN 27 716 IPR045271 GO:0004714|GO:0006468
Amo16g3917 725 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 27 716 - -
Amo16g3917 725 ProSitePatterns Tyrosine protein kinases specific active-site signature. 523 535 IPR008266 GO:0004672|GO:0006468
Amo16g3917 725 MobiDBLite consensus disorder prediction 703 725 - -
Amo16g3917 725 Pfam Protein tyrosine and serine/threonine kinase 406 617 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3917 Amo-Chr16 150944521 150951435 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Amo16g3917 PK_Tyr_Ser-Thr 7.4e-41 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3917 16 150944521 150951435 Amo16g3917 16 150944521 150951435 ECH