Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3886 ATGCAGGGAAATTTGAGAAATGCAGCAACAACAAAAGGTGGAAGAAAATCCATAAGCAGAGAAAGAAAACTAGCATTGCAACAAGATGTAGATAGTTTGAAGAAGAAGCTAAGGAATGAAGAGAACATTCATAGGGCATTGGAAAGAGCTTTTAATAGACCTTTGGGAGCATTGCCTAGGCTTCCTCCTTATCTCCCTCCATATATACTGGCGCTTCTCGCGGAAGTAGCAGTTTTGGAAGAGGAGATTGTTAGCCTTGAAAAGCAGGTTGTGCATTTCAGGCAAGACTTGTACCAAGAAGCTGTTTACATGTCTTCTTCTAAGAGGAAAATGGAGCATTCAGCTCATTCAAACAATCCAAATCCAACAATGGATACTCCAAAATTGGATACATTGAAGCATTTTTCACAGAAATCTGGTAATCCAGCAACATCTGCAACTGTTCCAGAGGATAGAAAAGGAAAAGAGAATCAGTCATGTACCAATTCTTCCAAGAGTAGGAAGCAATCTTCAAACCAAACAAATAAAACTCCAATCAAGAAACTTTCCATTGACAATAAATCACTACAAAAAAGTTTGGATACTCCAAGAAGGCAGCAAGAAACAAGGGTAAATGACCAACAAATTGCAGAACTAAGAAATCCTAGTCAACACAAAAGGCCACTACCAGAATCTGATAGCCCAAATATAATCTCTGAGAATATTCTGAAGTGTTTATCAAGCATTCTCTTGAGAATGAGTGCTGTGAAGAATCCATGCTCTGTAGGTAACACACTAACGCGCCAAAACTGTATCGAAGGGACTGAAGTTTGGGATCCATATGGTGTCTGTTTGGAATTTGGACAGCATGATATCGGTCCATACAAGCAGTTATGTGCAGTTGATGCGAAATCTTTCAATCCAAATCGAACAGCAAACACTTTGTTTTTACAACATAGATTGAAACTTTTATTTAGGAAACTTGCCTCTGTCAACTTAGAGAAACTTAACCATCAAGAGAAGCTTGCATTCTGGATCAACATTTATAACTCCTGTATGATGAATGCATTCATAGAGGGTGGCACACCAGAGAGTCCAGAAGCGGTTGTTACATTGATGCAGAAGGCAACAATCAATGTTGGTGGGCACATGCTGAATCCAACAACCATAGAGCATTTCATTTTAAGACTTCCTTACCATTGGAAATTTACGTTCTCAAAGGGAGCGAAAAATCACGAAATGACAGCAAGAAGCATGTTTGGACTGGAATTGTCAGAACCCTTGGTGACATTTGCTCTCTCTTGTGGTACCTTGTCCTCTCCTGCTGTGAGAGTTTACACAGCATCCCAAGTTGAGAACCAGCTAGAAGTGGCTAAAAGAGAGTATTTGCAAGCAACTTTTGGAATCTCAACAACCAAATTTGCTATCCCAAAGTTGCTTGATTGGTATTTACTTGATTTTGCAAAGGACTTGGAATCATTATTGGATTGGATATGTCTCCAATTACCAAGTGAATTGGGGAAAGAAGCAATCAAATTACTTGAGGAAAGAAAAACTGAACCTCTCTCTCAATTTGTACAAATTATGCCATACGAGTTCAGTTTTAGATACTTGCTATGCACATAG 1605 0.39 MQGNLRNAATTKGGRKSISRERKLALQQDVDSLKKKLRNEENIHRALERAFNRPLGALPRLPPYLPPYILALLAEVAVLEEEIVSLEKQVVHFRQDLYQEAVYMSSSKRKMEHSAHSNNPNPTMDTPKLDTLKHFSQKSGNPATSATVPEDRKGKENQSCTNSSKSRKQSSNQTNKTPIKKLSIDNKSLQKSLDTPRRQQETRVNDQQIAELRNPSQHKRPLPESDSPNIISENILKCLSSILLRMSAVKNPCSVGNTLTRQNCIEGTEVWDPYGVCLEFGQHDIGPYKQLCAVDAKSFNPNRTANTLFLQHRLKLLFRKLASVNLEKLNHQEKLAFWINIYNSCMMNAFIEGGTPESPEAVVTLMQKATINVGGHMLNPTTIEHFILRLPYHWKFTFSKGAKNHEMTARSMFGLELSEPLVTFALSCGTLSSPAVRVYTASQVENQLEVAKREYLQATFGISTTKFAIPKLLDWYLLDFAKDLESLLDWICLQLPSELGKEAIKLLEERKTEPLSQFVQIMPYEFSFRYLLCT* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3886 534 PANTHER TRANSCRIPTION FACTOR 4 533 - -
Amo16g3886 534 Pfam Protein of unknown function, DUF547 327 456 IPR006869 -
Amo16g3886 534 MobiDBLite consensus disorder prediction 1 20 - -
Amo16g3886 534 PANTHER EXPRESSED PROTEIN 4 533 - -
Amo16g3886 534 Pfam Leucine-zipper of ternary complex factor MIP1 20 100 IPR025757 -
Amo16g3886 534 Coils Coil 69 96 - -
Amo16g3886 534 Coils Coil 23 50 - -
Amo16g3886 534 MobiDBLite consensus disorder prediction 108 228 - -
Amo16g3886 534 MobiDBLite consensus disorder prediction 159 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3886 Amo-Chr16 150669110 150672852 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3886 16 150669110 150672852 Amo16g3886 16 150669110 150672852 ECH