Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3874 ATGCAAGGTATATCCGTTGAGAGATCACACTCAAGTGTTGAACAAATTCAGCCCCCAACTTATGGGAACTTAATTACCATTCTCAGCATTGATGGAGGTGGTATTAGGGGCATTATTCCAGCTACCATTCTTGAATTCCTTGAATCTCAATTTCAGGAGTTAGATGGTGAAGATGCAAGACTTGCAGACTATTTTGATGTGATATCAGGTACAAGCACTGGAGGACTTGTAACTGCAATGTTAACTGCTCCAGATCAAAATAATCGTCCACTTTTTGCTGCTAAAGATATCAAACCATTTTACTTGGAACACTGTCCAAAAATTTTCCCACAACCTAGGGGGCTATGTAGAACATTACTGGCAAAGGTAATAAAATCATTGCTGAGAGGACCAAAGTATGATGGGAAATACTTACATAAAGTGGTTAGAGAGAAGCTTGGAGACATTAGTTTAAATGAGACAATTACCAATGTTGTCATTCCCACTTTTGATATCAAGTCATTGCAACCAACTATATTCTCATCTTATCAGATTAAGAGTAGTCCTAGCTTGGATGCTAAATTATCCGATATATGCATTAGCACATCAGCTGCACCAACCTATCTCCCTGCTCATCACTTCACTACCAAAGATGCAAATGGAAATCCACATGAATTCAACCTCATCGATGGTGGTGTTTGTGCCAATAATCCGACATTAGTTGCAATGAATCAAGTGACAAAGCAAATTCTTGATGAAAATGTTGATTTCTTTCCAATCAAGGCTGCGGAATATCGTCGGTTTTTAATAATTTCAATAGGAACTGGGACAGCCAAAAATGAAGAAAAATTCAATGCAAAAATGGCAGCAAAATGGGGGCTTTTGGATTGGTTTATTCATAGTGGCTCCACTCCTTTAATTGATGTTTTCTCTCAATCAAGTGGTGATATGGCTGATTTTCATTTAACTACTCTCACTCAAGCACTTCATTTAGAACATAATTACCTTCGAATTCAGGATGACACATTGACTGGAACTGATGCTTCCGTTGACATTTCCACCAAAAAGAATTTGGAGAGGCTTAGCCAAATTGGTGAAAATTTATTGAAGAAATCAGTCTCTAGGATTAATTTAGAGAATGGTAGGTTTGAGCCAATCAAAAATGGAGGAACAAATGAAGATGCACTCAAAAGGTTTGCCAAAATACTTTCGCAAGAGAGAAGTCTTCGTGACGTGAGATCCCCACACACTAAAAAGACCCGTCACTAG 1248 0.3814 MQGISVERSHSSVEQIQPPTYGNLITILSIDGGGIRGIIPATILEFLESQFQELDGEDARLADYFDVISGTSTGGLVTAMLTAPDQNNRPLFAAKDIKPFYLEHCPKIFPQPRGLCRTLLAKVIKSLLRGPKYDGKYLHKVVREKLGDISLNETITNVVIPTFDIKSLQPTIFSSYQIKSSPSLDAKLSDICISTSAAPTYLPAHHFTTKDANGNPHEFNLIDGGVCANNPTLVAMNQVTKQILDENVDFFPIKAAEYRRFLIISIGTGTAKNEEKFNAKMAAKWGLLDWFIHSGSTPLIDVFSQSSGDMADFHLTTLTQALHLEHNYLRIQDDTLTGTDASVDISTKKNLERLSQIGENLLKKSVSRINLENGRFEPIKNGGTNEDALKRFAKILSQERSLRDVRSPHTKKTRH* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3874 415 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 28 236 IPR002641 GO:0006629
Amo16g3874 415 PANTHER PATATIN 7 412 - -
Amo16g3874 415 CDD Pat17_isozyme_like 22 374 - -
Amo16g3874 415 PANTHER XYLOSE ISOMERASE 7 412 - -
Amo16g3874 415 Gene3D Cytosolic phospholipase A2 catalytic domain 14 408 - -
Amo16g3874 415 Pfam Patatin-like phospholipase 28 236 IPR002641 GO:0006629
Amo16g3874 415 SUPERFAMILY FabD/lysophospholipase-like 24 373 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3874 Amo-Chr16 150544096 150550203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3874 16 411 Miscellaneous Gene Families AT2G26560 64.394 0.0 521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3874 16 150544096 150550203 Amo16g3874 16 150544096 150550203 ECH