Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3856 ATGCAAGCTGTGGAGAGGCTAGGGAGCTTCATCACCCGCGGAGTCTCGACTGTTTCAATGCCGTTCATCCCTTATGGTGGTGCTGTGGACATTGTTGTAGTTCAACAAAAAGATGGCAGCTTCAAGTCCTCTCCTTGGTTCGTTCGATTCGGGAAACTTCACAGGGTTCTCAAGGCTGATGAGAAGAAGGTTAGCATCAGTGTCAATGGATCCGAAGCCGGTTTCCACATGCACATGAACCATAAAGGGGAAGCCTTCTTTTTGAGGGATACACATTGTGAACAACAAGGGGATGAAGATTCTGGATCTAGCGAATCATCCTCGTCCGGCGAAGATGCTGATGTTGTCCTACCATGGGGCAGGAAGAGGAATTTCAAGTCAAAAAGTTGCAAGTTTGATCCGGATGGATCATTTGTAGCTGATATGAATGCCTTAAACAATGATAAGATTGTGGACAGGACTAATTCTCGCGGATCCCGGCTATTTAGGCTTGTGTTGGGGCAAAGGTCCTTCAATGGGGAAGTTGATGAAGATGCAGAAGACTTATTGGAACGTGCTGAGATTGCAGCCAACCTTTTGGACCTCAAGTGGTCTACAAATCTGAAATTCGACCAGCTACCTCGTCGAGAAAGAAAGAACACTAGGGGTGGTACCTTGGAGAATGGTTTACATTCATCTAAGGTTGATGATTTGCATGCTCAGCAAAGGGATTGTTCTCATAGTGTCCTTGATATGTTTGATGTTGCGGACTTTGAAAAGCTACCTAAATTTCAAAAATCTCGCACCATTAGTGTATATCGGCCACATCGAAAAGCCAACAAGGTTAGGGCAGATACCCCAACATCTGAACAGCTAGCATCCTTGAATCTCCAGGAAGGAAGGAACTTGGTAACCTTTCGTTATTCGACAGCTATGTTGGGGACACAGAAGATTGATGCTCGGATATATTTGTGGAAATGGAACACCCGAATAGTGATATCGGACGTGGATGGAACAATTACAAGGTGA 1008 0.4514 MQAVERLGSFITRGVSTVSMPFIPYGGAVDIVVVQQKDGSFKSSPWFVRFGKLHRVLKADEKKVSISVNGSEAGFHMHMNHKGEAFFLRDTHCEQQGDEDSGSSESSSSGEDADVVLPWGRKRNFKSKSCKFDPDGSFVADMNALNNDKIVDRTNSRGSRLFRLVLGQRSFNGEVDEDAEDLLERAEIAANLLDLKWSTNLKFDQLPRRERKNTRGGTLENGLHSSKVDDLHAQQRDCSHSVLDMFDVADFEKLPKFQKSRTISVYRPHRKANKVRADTPTSEQLASLNLQEGRNLVTFRYSTAMLGTQKIDARIYLWKWNTRIVISDVDGTITR* 336
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3856 335 MobiDBLite consensus disorder prediction 94 113 - -
Amo16g3856 335 PANTHER GH19076P 260 335 - -
Amo16g3856 335 PANTHER GH19076P 1 213 - -
Amo16g3856 335 Pfam LNS2 (Lipin/Ned1/Smp2) 279 335 IPR013209 -
Amo16g3856 335 Pfam lipin, N-terminal conserved region 1 96 IPR007651 -
Amo16g3856 335 PANTHER LIPIN 260 335 IPR026058 -
Amo16g3856 335 PANTHER LIPIN 1 213 IPR026058 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo16g3856 Amo-Chr16 150392211 150393413 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3856 16 150392211 150393413 Amo16g3856 16 150392211 150393413 ECH
Amo16g3856 16 150392211 150393413 Amo17g2387 17 119790866 119797444 PCT
Amo17g2387 17 119790866 119797444 Amo16g3856 16 150392211 150393413 PCT