Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3853 ATGATGGAGGTTTCATCAAGTTTTCAAAAAGTGTTGAAAACATCACCTTCTAGAAAAAAAGCATTGGTGATTAGAATCAACTTGCTCTGTCTTGCAATGTTTCTCATAGTTTATGCAACACTTCTATTTCGTCCATCTTCTTCTATCTATTTTGAGAATGCAGCATCACTTGTCAAATGCTCCTTACGTGAATGCCATCACAAGGCAGAAAAAAGCATAAAAATGAAAGCAGTGATGGAAGAGCCTCAAGTGAAAGCACCAAAGATGCCAAAGAAGAATGCAATGAAGATAGAGAAGCCTAGTTTCTTTGATCAAATTATGGGTAAAGGAGTGAAGAACATTGGTATGGTGAACTTTGATGAAGAAGAAGATGATGTTAGTGAATGGAACATGCAAGGTGAAAAAACAATCATCCCAATTCACTTTGAGAAGGTATCCTCCCAATTCAATTGGACAGATTTGTTCCCTGAATGGATCGACGAAGAAGAAGAGAGCGATGTTCCATCTTGTCCAGATATTCCCATGCCGGATTTCAATGTGCATCAAAACATGGACATAATTGTGGCGAAGTTGCCATGCAACAATAATAAAGAAGGGTGGGGTAGGAATGTTTATAGGCTACAAGTTCATCTAATTGTGGCAAATTTGGCTGCGAAGAATAAGGGTAAGAGGGATTATGGGAGATTGAAGACTAAGGTTGTTTTTTTAAGCAAGTGTAGGCCAATGTTGGAAATTTTTAGGTGCAATGATTTGGTTAAGAATGATGGTGATTGGTGGTACTATGAGCCTGATTTGAAGAGATTGGAGCAAAAGGTTTCATTGCCTGTTGGATCATGCAAGTTGGCTTTGCCTCTTTGGGAACAAGGGATTGACAAAGTGTATGACACGTCCAAGATTCAAAAAATGGTTAGAAAGAATGCAAAAACAAAACGTGAGGCGTACGCTACAGTGCTTCACTCCTCCGACGACTATGTGTGCGGCGCAATAATGCTGGCACAAAGCCTCCTCCGAACGGGAACCAAGCGTGACCTAATCCTCCTTCTCGACAACTCCATCTCTCCTGCAAAGCGTCGTGCGCTCTCCACCTCTGGGTGGAAGATCCGAATCATAACTCGGATCAGAAACCCAAAGGCGGAGAAACACTCCTACAACGAGTACAACTACAGTAAATTTCGGTTGTGGCAGTTAACAGACTATGACAAGGTTATTTTTATTGATGCTGACATTGTTGTTTTGAGGAACCTTGATGTTCTGTTTCATTTTCCGCAAATGTCGGCCACTGGGAATGATCAAAGTATATTTAATTCTGGGATTATGGTGATTGAGCCTTCAAATTGCACATTTAATGTGCTGATGGAGAGTAGATATGATATTGTTTCATATAATGGTGGTGACCAAGGCTTCCTTAACGAGATTTTTGTCTGGTGGCACAGGTTACCAAGGAGGGTGAACTACTTGAAGAATTTTTGGGCCAACACAACATTAGAAGCAAGCAAGAAGAACCATCTATTTGGAGCAGAGCCACCAAAGCTATACTCAATACACTACCTTGGATTAAAGCCATGGTATTGTTATAGGGACTATGATTGCAATTGGGACGTTGAGGACCAAAGGGTGTATGCTAGTGACGTGGCACATCATAAGTGGTGGAAGCTGCATGACCAAATGGACAAAAAGCTTCAACGCATGTGTAGGCTCACAAAACGACGTCGTACAAACCTCAATTGGGAGAGAAGAAAAGCTTCCAAATTAGGTTTGCCCGATCAACATTGGAAGATTAATATTACGGATCCCAGAAGATCTGGTTCACTTTTGATGAATTAA 1824 0.4095 MMEVSSSFQKVLKTSPSRKKALVIRINLLCLAMFLIVYATLLFRPSSSIYFENAASLVKCSLRECHHKAEKSIKMKAVMEEPQVKAPKMPKKNAMKIEKPSFFDQIMGKGVKNIGMVNFDEEEDDVSEWNMQGEKTIIPIHFEKVSSQFNWTDLFPEWIDEEEESDVPSCPDIPMPDFNVHQNMDIIVAKLPCNNNKEGWGRNVYRLQVHLIVANLAAKNKGKRDYGRLKTKVVFLSKCRPMLEIFRCNDLVKNDGDWWYYEPDLKRLEQKVSLPVGSCKLALPLWEQGIDKVYDTSKIQKMVRKNAKTKREAYATVLHSSDDYVCGAIMLAQSLLRTGTKRDLILLLDNSISPAKRRALSTSGWKIRIITRIRNPKAEKHSYNEYNYSKFRLWQLTDYDKVIFIDADIVVLRNLDVLFHFPQMSATGNDQSIFNSGIMVIEPSNCTFNVLMESRYDIVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWANTTLEASKKNHLFGAEPPKLYSIHYLGLKPWYCYRDYDCNWDVEDQRVYASDVAHHKWWKLHDQMDKKLQRMCRLTKRRRTNLNWERRKASKLGLPDQHWKINITDPRRSGSLLMN* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3853 607 CDD GT8_Glycogenin 312 556 - -
Amo16g3853 607 PANTHER GLYCOGENIN SUBFAMILY MEMBER 9 601 - -
Amo16g3853 607 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 9 601 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Amo16g3853 607 SUPERFAMILY Nucleotide-diphospho-sugar transferases 314 562 IPR029044 -
Amo16g3853 607 Pfam Glycosyl transferase family 8 317 522 IPR002495 GO:0016757
Amo16g3853 607 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 310 561 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3853 Amo-Chr16 150339025 150344509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3853 75 607 Glycosyltransferase AT4G33330 65.549 0.0 718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3853 16 150339025 150344509 Amo16g3853 16 150339025 150344509 ECH
Amo16g3853 16 150339025 150344509 Amo17g2391 17 119832093 119836304 PCT
Amo17g2391 17 119832093 119836304 Amo16g3853 16 150339025 150344509 PCT