Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3852 ATGGAGGGTGTTGAGGAGAATCTACCCTCATCAGAATCCTCTTCAGAAAGTGCTAATGAGCAAAAGCAGCAAAATGTAGAAACCCCTGGTGAAACTTCACATGTAAATGAATCCACTGTTAGTGATAGTAGAGAAGAATCCGAGACTCGTTTGCCGGTGACAACAGCCGAGGAATTAACCGAATCAGCAATGCTGCCTAATGCTTCTTCTGGTAGTCCAATTATTGTTGAAGAAATTGAAAATCCTCCCACAGATGACTCGGCATCATCGCCGCTGGATGATACTAAGCTTCACACAGCAGGATCAAATGATGATCAAATCATAGAACAAGATAATTCAGGTTCTACAGAGAATGCAGATTCTGAAGAGATCCTTGAGCAGCAGAAGAATGTTGAGACTGATGATTCAAATGATGTCCAAATCACAGAACAAGATGATTTAGCTTCTACAGCGAATGCAGATTCTGAAGAGATCCTTGAGAAGCAGGAGATTGTTAATAATGATGATCAAATCATAGAACAAGAAAATTCAGCTTCTATGGAGAATGCAGATTCTGAAGAGATCCTTGAGAAGCAGGAGGATGTTAATAATGATGATCAAATCATAGAACAAGATAGTTCTGCTTCTACAGCAAATGCAGATTCTGAAGAGATCCTTGAGAAGCAGGAGAATTTTCATAATGGTGATTCAAATGATCATCAAACGTTAGAACAAGATAATTCAGCTTCTACGGCAAATGCAGATTCTGAGGAGATCCTTGAGAGGCAAAAGAATGTTAATGATGAAGACTCAAAAGATAATCAAATCATAGAACAAGATAATTCAGCCTCTGCAGAAAATGCAGATTCTGAAGAGATCCTTGAGAAGCAGGAGAATGTTACTAATGATGATCCAAATGATGATCAAATCATAGAACAAGATAATTCAGCTTCTACGGCGATTGCAGATTCTGAAGAGATTCTTGAGAAGCAGGAGAATGTTAATGATGAAGATTCAAAAGATGATCAAATCATAGAACAAAATTCAGCTTCTACAGAAAATACAGGTTCTGAAGAGATCCTTGAGCAGCAGAATAATGTTAATGATGAAGATTCAAAAGATGATCAAATCATAGAACAAAATTCAGCTTCTACAGAAAATACAGGTTCTGAAGAAATCCTTGAGCCGCAGAAGAATGTTAATGATGAAGATTCAAAAGATGATCAAATCATAGAACAAAATTCAGCTTCTACAGAAAATACAGGTTCTGAAGAAATCCTTGAGCCGCAGAAGAATGTTAATGATGAAGACTCAAAAGATGATCAAATTATAGAGCAAGATAATTCAGCTTCTACAGAAAATCCAGGTTCTGAAGAGATCCTTGAGCAGCAGAAGAATGTTAATACCGATAATTCGAATGATGGCCAAATCATAGAACAAGAGAATTCAGCTTCTACAGAAAAAGCAAATTCTGAAGAGATCCTTGAGAATCAGAAGAATATTAACAATGATGAATCTAGTGTCACTACCATCGATGATCAAATGGAGATTCCAGCTTCTAATCCTGAAACAAAAGAGTTCCATGATGACAGTACCAAAGAAGTTATGTTATCATTGCCGCAAATCATAGTTACTGATTTTAGCAAGGAAAATTCAACACTGACGAGTTCAAATTCTTGTAATGCTATGGATACCATGAATGCTGATTCTGAACCGGAAGATTTCTATGATAGTAATCAAGGTGGTTCTGCCGTTAAAATTTCTTCCAGTATGGATGCAAATGACTTGATTAAACGGTCTACATCGGCACCGGAAATAAAATTGTTGCAGATGCTAAAGGAGAATAGAAGACGAAAGATGAACTCAACGGCTCGAAAAAAGGCTGATGTTGCTCATATACCAACCGGCTCGCCTTCAAGTTCCAAGAAAAATGCTGAGAATAGAGGCTTCATCGACACGGCAGCTCCCTTCGAATCTGTAAAGGAAGCTGTTTCCAAGTTCGGAGGAATTGTAGATTGGAAGGCTCATAAGAAACAGACCGTGGAGAGACGAAAGGACGTAGAACAAGAACTCGAGAAAGTGCAGCAGGAGATCCCAATATACAAAAAGAAATCAGAAGCTGCAGAGAAAGCGAAACAAGAAGTACTTCAGGAGCTGGACACCACCAAGAGACTAATAGAAGAGCTGAAACTGAACCTGGAGAGAGCACAAACCGAAGAGCGTCAGGCAAGACAGGATTCGGAACTCGCGAAACTCAGAGTGGAAGAGATGGAGCAAGGTATCGCCGAGGACTCTAGCGTGGCGGCCAAGGCACAGCTTGAGGTCGCAAAGGCCAGGTACACTGCGGCAGTTACAGAGCTAACATCTGTGAAAGAGGAGCTGGACGCGTTGCGTAAGGAATACGCTTCCTTAGTTGTTGAAAAAGAGGAAGCTATTCAGAAATCGGAAGAAGCAATTACTTCGTCCAAACAGGTTGAGAAGACTGTGGAAGAATTAACGATTGAGTTGCTTGCTATAAAGGAGTCGATGGAAGCAGCACATGCAGCGCACATGGAAGCCGAAGAACATCGGATGGAATCGGTTATGGCTAGGGATCAGGACTCTCTCAATTGGGAAAAAGATCTTAAACACTCCGAGGAAGAACTTCAAAGAATAAACCAGAAAATCTTAGCTGCTAAAGATCTGAAGTCTAAATTGGACACAGCCTCGACTTTGCTGACGGATCTGAAAGATGAAATGAATGCTTATACAGAAGCACAGTCGAGGCAAGACGGAAGTGCCGAACGTGAAGAACTGTGGCCTTTGAGGACGAAGATACACAATGAAATAAAAGAAGCCGTTGAATCTGCGAAGAAGGAACTTGCGGAAGTGAAAAGTAACATAGAAAAAGCAACTGCTGAGGTTAGTAACTTAAAGGAAGCCGCAGCGGCGTTGAAAACAGAACTTGAGGAAGAGAAATTGAACCTTGCATCGATTCGGCAGAAAGAGGAAATGGCCTCAATCACTGCGAAATCTCTAGAAGCTGAAGTAGAGAAAAGCAGAACAGAAAAGCTTCTGCTTCAGATGAAAGAAAGGGAAGCTAGAATCCCGCAGAAAGTACGAGAAGCTGCTGAAGAGGCTAAAGAAGCCAACTCACTCAGTCAAGCAGCTCGCGAAGAGCTGCAGCGAGCGAAGGAGGAGGCCGAGCAAGCGAAGGCGGCAGCGAGCGCAATGCAGAGCAGATTACTTGAAGTTCTAAAGGAGATTGAGGCTGCCAAGACTTCGGAGAGATGCGCAATGGCGGCAATCAATGCATTGAAGGAGAGTGAATTAGCTCAAAGCAGCCAAGAAGCAGATTCGTCGGCGGAGGTAGTGACACTTTCTTTGGAGGAGTATTACTTGCTGAGCAAGCATGCACATGAGGCTGAAGAGGGAGCCAAGGCAGTGATGGCGACGGCGAATGCTGAAATTGAGGCAGCTAAGGAATCTGAAATGACAAGTTTGGAAAAGTTGAATGAAGTGAATACAGAGATTGCTGCTAGAAGAGAAACTTTAAGGGATGCAATGTGTAAAGCTGAGAAGGCTAAAGAAGGAAAGTTAGGCATGGAATACGAGTTGCGAAGATGGAGGTCGGAGCGCGACAGAGGGGAACACCAGAAAAGCATGTCCGGGGACAGTTTTGATTCAGGTTCAAGGGGTTATGACAGTGCAATTGGATCACCAGATTTAAGAAATGGAAAGAAGAAGAAGAAGTCATTTTTTCCAAGGTTTTTGATGTTCTTTGCAAGAAGAAAATCATATTCGTCACATCACTGTAGTCCCTATTGA 3786 0.4171 MEGVEENLPSSESSSESANEQKQQNVETPGETSHVNESTVSDSREESETRLPVTTAEELTESAMLPNASSGSPIIVEEIENPPTDDSASSPLDDTKLHTAGSNDDQIIEQDNSGSTENADSEEILEQQKNVETDDSNDVQITEQDDLASTANADSEEILEKQEIVNNDDQIIEQENSASMENADSEEILEKQEDVNNDDQIIEQDSSASTANADSEEILEKQENFHNGDSNDHQTLEQDNSASTANADSEEILERQKNVNDEDSKDNQIIEQDNSASAENADSEEILEKQENVTNDDPNDDQIIEQDNSASTAIADSEEILEKQENVNDEDSKDDQIIEQNSASTENTGSEEILEQQNNVNDEDSKDDQIIEQNSASTENTGSEEILEPQKNVNDEDSKDDQIIEQNSASTENTGSEEILEPQKNVNDEDSKDDQIIEQDNSASTENPGSEEILEQQKNVNTDNSNDGQIIEQENSASTEKANSEEILENQKNINNDESSVTTIDDQMEIPASNPETKEFHDDSTKEVMLSLPQIIVTDFSKENSTLTSSNSCNAMDTMNADSEPEDFYDSNQGGSAVKISSSMDANDLIKRSTSAPEIKLLQMLKENRRRKMNSTARKKADVAHIPTGSPSSSKKNAENRGFIDTAAPFESVKEAVSKFGGIVDWKAHKKQTVERRKDVEQELEKVQQEIPIYKKKSEAAEKAKQEVLQELDTTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIAEDSSVAAKAQLEVAKARYTAAVTELTSVKEELDALRKEYASLVVEKEEAIQKSEEAITSSKQVEKTVEELTIELLAIKESMEAAHAAHMEAEEHRMESVMARDQDSLNWEKDLKHSEEELQRINQKILAAKDLKSKLDTASTLLTDLKDEMNAYTEAQSRQDGSAEREELWPLRTKIHNEIKEAVESAKKELAEVKSNIEKATAEVSNLKEAAAALKTELEEEKLNLASIRQKEEMASITAKSLEAEVEKSRTEKLLLQMKEREARIPQKVREAAEEAKEANSLSQAAREELQRAKEEAEQAKAAASAMQSRLLEVLKEIEAAKTSERCAMAAINALKESELAQSSQEADSSAEVVTLSLEEYYLLSKHAHEAEEGAKAVMATANAEIEAAKESEMTSLEKLNEVNTEIAARRETLRDAMCKAEKAKEGKLGMEYELRRWRSERDRGEHQKSMSGDSFDSGSRGYDSAIGSPDLRNGKKKKKSFFPRFLMFFARRKSYSSHHCSPY* 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3852 1261 MobiDBLite consensus disorder prediction 282 296 - -
Amo16g3852 1261 Pfam Weak chloroplast movement under blue light 641 1200 IPR008545 -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 134 151 - -
Amo16g3852 1261 PANTHER WEB FAMILY PROTEIN-RELATED 1224 1253 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 7 37 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 250 269 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 1028 1055 - -
Amo16g3852 1261 Coils Coil 861 912 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 83 121 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 371 388 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 216 233 - -
Amo16g3852 1261 Coils Coil 933 988 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 389 403 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 422 439 - -
Amo16g3852 1261 Coils Coil 773 807 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 184 198 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 234 249 - -
Amo16g3852 1261 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 614 1201 - -
Amo16g3852 1261 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 1224 1253 - -
Amo16g3852 1261 Coils Coil 1026 1067 - -
Amo16g3852 1261 PANTHER WEB FAMILY PROTEIN-RELATED 614 1201 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 1197 1234 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 318 337 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 169 183 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 615 641 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 404 421 - -
Amo16g3852 1261 Coils Coil 1154 1174 - -
Amo16g3852 1261 Coils Coil 670 748 - -
Amo16g3852 1261 Coils Coil 996 1016 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 1 521 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 440 510 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 338 356 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 53 69 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 38 52 - -
Amo16g3852 1261 MobiDBLite consensus disorder prediction 201 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3852 Amo-Chr16 150311025 150315549 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3852 16 150311025 150315549 Amo16g3852 16 150311025 150315549 ECH
Amo16g3852 16 150311025 150315549 Amo17g2392 17 119838866 119843772 PCT
Amo17g2392 17 119838866 119843772 Amo16g3852 16 150311025 150315549 PCT