Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3841 ATGAACCCGCGCTCTTACACAGAGACGCTGATGAGAGCAGTTGAAGACGGTGGCGGCATGGAGGACGAGGAGATGGTGGTTCCGACGGCGGAAAGCGGCAGCAGAGGCTCCAATGCTTCTTCATCGGAGGAATGTCCGTTCCGATTGCTGCGAGACGCGAAGGCTTCGGCAGAGAGCATCGTGGCGGAGATGTTGTCTATTAAGAGAGATGGAAAACCCAAATCGCTCCTCAGAGAACTCATTTCTCAGATGCTCCTTCAATTCCTCAATCTCCGTCAGATAAATCGTTCTATACTGGTTGAGGAAGAACGTGTTAGAAGCGAAACTGAGAGTGCAAAGGTGCCTTTGGAGTCTACAACCCTGCAGCTTCACAATCTGATGTATGAGAAGAGTTATTATGTCAAAGCAATAAAGGCTTGCAAAGAATTAACAACAAAATATCCTGATATTGAATTGGTGTCCGAGGAAGAGTTTTTTCGTGATGCGCCTGAAGAAGTCAAGGGCTGTGTTCTGTCAAATCACAGTGCTCATGATCTGATGCTTAAAAGGCTCAATTTTGAGCTATCCCAGCGCAAAAAGCTCTGTAAACTTCATGAAAAACTAGAACAAAAGAAGAAAACCCTTTCGGAGACAATTGCAAAGCGAAAGAAGTTTTTGTCAACACTCCCTTCAAATTTCAAGCCCCTTAAGAAAGCTTCCTTACCAGTACAAAATCAACTAGGCTTGGAGCATACTAAGAAAATAAAGAGGCATCATTCTGCGGAATTGCTTCCACAACCTCTTTATGTAATTTTCTCACAGTTGTCAGCTCAAAAGGAAGCATTTGGAGAAGCTATTGATCTGGAGATTATAGGAAACGTGAAAGATGCTCAAGCTTTAGCACATCATCAAGCTCTTAAGGACAATGGTATTTCCACAGGTTCCGAATTGGAAGATGATGAACACAATGAAGATGCTCAGAGACCGGGCAAAAGGCTGAGGAGGGTTCAAGACAGAGAGAGTCTTGACCAGGCAGGAATATTTGAAGTTCATCCACTTCAAATTGTTCTCCATGTTTATGACAATGAGGTTTCTGAACTGAAGTCTGCAAAACTCATTACTCTGAAATTCGAGTACATATTGCAGTTGAATATTATATGTGTTGGAACGGAAGAATCCAACAATGGTCCAGAGAATGACATTTTATGCAATTTATTCCCTGACGACACTGGTTGCGAGCTTCCTCACCAGTCAGCCAAACTCTTTGTTGGGGATTCCATAATGTTCATTCGTGATAGAACTTCCCGCCCTTACAAATGGGCTCAACACCTTGCCGGAATCAATTTCTTGCCAGAGGTGTCTCCTCTGCTGCTGATGAGCCGTGAAACTCAAGAGAACAGTGATGCAGCCAAGGATGAAGATGTTATATCTGGCTTTTTGCCAAACCGCCAACACATCCGAGTACATACAATTCTGCAGAGAATTCGTTCAAGGAGAAAAACTCAGTTGGCTCTCTCCTGA 1500 0.4373 MNPRSYTETLMRAVEDGGGMEDEEMVVPTAESGSRGSNASSSEECPFRLLRDAKASAESIVAEMLSIKRDGKPKSLLRELISQMLLQFLNLRQINRSILVEEERVRSETESAKVPLESTTLQLHNLMYEKSYYVKAIKACKELTTKYPDIELVSEEEFFRDAPEEVKGCVLSNHSAHDLMLKRLNFELSQRKKLCKLHEKLEQKKKTLSETIAKRKKFLSTLPSNFKPLKKASLPVQNQLGLEHTKKIKRHHSAELLPQPLYVIFSQLSAQKEAFGEAIDLEIIGNVKDAQALAHHQALKDNGISTGSELEDDEHNEDAQRPGKRLRRVQDRESLDQAGIFEVHPLQIVLHVYDNEVSELKSAKLITLKFEYILQLNIICVGTEESNNGPENDILCNLFPDDTGCELPHQSAKLFVGDSIMFIRDRTSRPYKWAQHLAGINFLPEVSPLLLMSRETQENSDAAKDEDVISGFLPNRQHIRVHTILQRIRSRRKTQLALS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3841 499 Coils Coil 191 211 - -
Amo16g3841 499 MobiDBLite consensus disorder prediction 303 329 - -
Amo16g3841 499 MobiDBLite consensus disorder prediction 306 329 - -
Amo16g3841 499 PANTHER FMS INTERACTING PROTEIN 34 499 IPR019163 -
Amo16g3841 499 Pfam Fms-interacting protein/Thoc5 90 442 IPR019163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3841 Amo-Chr16 150185605 150189141 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3841 16 150185605 150189141 Amo16g3841 16 150185605 150189141 ECH
Amo16g3841 16 150185605 150189141 Amo08g0380 08 7397042 7401148 PCT
Amo08g0380 08 7397042 7401148 Amo16g3841 16 150185605 150189141 PCT