Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3840 ATGGTTACGGAAGGACCCGCCATCGAAGCTCTCGGTTCTCTCTTCAAAATCACACAAGTCTTTCTATGGGATGATGGTTCTCCGGGTTCTCTCCCACTAGAAGGCTCTAAATCGGCTGAAGTTCATGGCAATGGCAATGACAATGACAATGACAATGAAAATGACAGCTCGAACCTTGTTCCTGATTGGAGCGATCTTCTCGAACCTGAGGATTTGGAACTTAACAAACAGATGAGTGAATTGGGTCTCCCTCTTTCCTTTCACACAACCAAAGAGAAAAGTGGACCAGGGAAAGGTAAAAAGAAGGGTTCACGTTCAAAGCTTCGGCGTACTTGTCATACTGCAGAGGAGGTTGTATCTGCTGCTGAATTTCATGATAAGGCAAGCAGTTCTGTATCTTGTATATCGATGCTGGGCCAAAGTGAATCATCTTACTGCAGTGTAGTGGAGATTGATATGACTCGATGTGCCTCTGTTGAAGGAGATAATTCAGCATGCTGCACTGCAGAGAAACATGATGAAGATATAATTGAGGCAGCAACTAATGAAACCCCAGATAGTGACTCTCTAATCAACAATACATGTGTTGATTTAAAAATTCCACCAGCTTTGGCCACCGGAGTCTCTGCTGGAAGCCACTTGACAAGTCCTAGCGCCAATTATTGTGGGATAAAACACAATGAAAGCTTAATTGATGTTGAATGTTTAGAAATTTCACCAATTGTTAGCAAAGAGACGACCGAGAGTGAGACCATTTGCAATGATGATGATGCTGGCACTTGGCATCCACCAACTAATGAATCAGAATTGGTTACCATGAGTATAGAAGGGACTGGATGTGGCCAAATCAACATGTCAAATTATCTTGGCGAACTCGGAGATTGGATGGTGTTTTGGGATACTTTCTACATGAGAAAATACTTCTATAATACCACAACACAGACTTCTACATGGGACCCACCCCAAGGGATGGAGCATCTAGCAATTGTTGAGTCTATTGAATTAGTCGATGGCGGGGCTTTAAAGGAAGCAGAGGAGTGCAAAACACAAAATAACACTAAAGCACCCCATGAAACCTTGATTGCAGAGGAGTCAGAAGGAAAACAACATGATGAGTATTCAACTAGTATCGAAGTTGGTGGGAAGTTGGTTTCCGATCTCACTACACATAGCGAGGACCAATTGGTGGATCATTCTGATGAGTATCTTGAGAGAAGTAGTTGCAACGGTAGAGTTTCATGCTCCTCAGTATCAAATGCCATGGAGCACACAATTAGTTCCAATGAAGGAAACATACAGGCAGCATCAGAGGTTAATTATAAACACTTAGAAAACATGGTTATTGATACACCTGAATATACTGAGTTTGATCCATCCACGTCAAAAGAGGGCAATAAAGTGAAAAGGAGACATAGGCAGAGAAGAAAATCCTATAGTGAAACTGAAGTTCAATTTCAAGAAATGCCTGAAGAGTATCCTGCTGCAATTGGCAAATATTGGTGGCAGAGATATATTTTGTTCTCTAGATTTGATGATGGTGTAAAAATGGATGAGGAAGGATGGTTTTCTGTCACTCCGGAGCCTATTGCTCGACATCAAGCAGAGCGTTGTGCTAGTGGCATTATAATTGACTGTTTTGTTGGCGTTGGTGGGAATGCTATCCAATTTGTGAAGAGTTGCAATCATGTGATAGCGATTGATATTGATCCGCTGAAGATTGATTATGCTAGGCACAATGCTGCCATTTATGGGGTGGATGATCAAATTAACTTCATAATCGGTGACTTCTTTGTCTTGGCACCTAAGTTAAAGGCCGATATGGTTTTCTTGTCTCCACCTTGGGGAGGACCTGATTATTTAAAGGTTGCGACTTATGACATGAAGACAATGCTTAAACCGCATGATGGATTTACTCTGTTCAATCTTGCGAAGGAGATTGCTTCCAAAGTTGTAATGTTCCTTCCAAGAAATGTAGATTTCAATCAATTGGCAGAGTTATCTCTATCTGCCAATCCACCATGGTCACTGGAGGTGGAGAAAGTTCACTTAAATGGAAAACTGAAGGCGATCACTGCGTATTTCAGCGACACAAGAGTTGGAGGTTGCTCGGTGAATAAACACATTCGCTTCTGCTCAAGCTCAAGTGATGAAGAATCAGGATCCCTGCAATGA 2172 0.4194 MVTEGPAIEALGSLFKITQVFLWDDGSPGSLPLEGSKSAEVHGNGNDNDNDNENDSSNLVPDWSDLLEPEDLELNKQMSELGLPLSFHTTKEKSGPGKGKKKGSRSKLRRTCHTAEEVVSAAEFHDKASSSVSCISMLGQSESSYCSVVEIDMTRCASVEGDNSACCTAEKHDEDIIEAATNETPDSDSLINNTCVDLKIPPALATGVSAGSHLTSPSANYCGIKHNESLIDVECLEISPIVSKETTESETICNDDDAGTWHPPTNESELVTMSIEGTGCGQINMSNYLGELGDWMVFWDTFYMRKYFYNTTTQTSTWDPPQGMEHLAIVESIELVDGGALKEAEECKTQNNTKAPHETLIAEESEGKQHDEYSTSIEVGGKLVSDLTTHSEDQLVDHSDEYLERSSCNGRVSCSSVSNAMEHTISSNEGNIQAASEVNYKHLENMVIDTPEYTEFDPSTSKEGNKVKRRHRQRRKSYSETEVQFQEMPEEYPAAIGKYWWQRYILFSRFDDGVKMDEEGWFSVTPEPIARHQAERCASGIIIDCFVGVGGNAIQFVKSCNHVIAIDIDPLKIDYARHNAAIYGVDDQINFIIGDFFVLAPKLKADMVFLSPPWGGPDYLKVATYDMKTMLKPHDGFTLFNLAKEIASKVVMFLPRNVDFNQLAELSLSANPPWSLEVEKVHLNGKLKAITAYFSDTRVGGCSVNKHIRFCSSSSDEESGSLQ* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3840 723 SUPERFAMILY WW domain 285 323 IPR036020 GO:0005515
Amo16g3840 723 MobiDBLite consensus disorder prediction 453 476 - -
Amo16g3840 723 ProSitePatterns WW/rsp5/WWP domain signature. 295 321 IPR001202 GO:0005515
Amo16g3840 723 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 508 631 IPR029063 -
Amo16g3840 723 SMART ww_5 290 323 IPR001202 GO:0005515
Amo16g3840 723 Gene3D Vaccinia Virus protein VP39 490 699 IPR029063 -
Amo16g3840 723 PANTHER S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED 79 697 - -
Amo16g3840 723 Pfam RNA cap guanine-N2 methyltransferase 541 695 IPR019012 GO:0001510|GO:0008168|GO:0009452
Amo16g3840 723 CDD AdoMet_MTases 542 622 - -
Amo16g3840 723 ProSiteProfiles WW/rsp5/WWP domain profile. 295 323 IPR001202 GO:0005515
Amo16g3840 723 MobiDBLite consensus disorder prediction 31 63 - -
Amo16g3840 723 MobiDBLite consensus disorder prediction 87 109 - -
Amo16g3840 723 CDD WW 293 323 IPR001202 GO:0005515
Amo16g3840 723 Gene3D - 286 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3840 Amo-Chr16 150176838 150181552 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3840 16 150176838 150181552 Amo16g3840 16 150176838 150181552 ECH