Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3839 ATGCCGGAGCTAGGGTTTCACCATCACCACCACGAATCAGCAGCCTCATGGATGAGAACAAGAGGAAGAAGCAGAAGCAGAAGGAGTAGCAGCAGCAGCCACACTCCTGCTTCTACCAGATCCACAGCTGCACTTCGCGGTGCCGCCGCCGCCGCTGCTGGTGACAGTACCAGTCCTGACTCCGTTATATTCACGCTCGAATCCAATCTCAGCTTCTTCTCCTCCGCCTCCGCCAGCGTCGAACGCTGCTCCTTCGCTTCCGATGCTCACGACCGTGATTCCCTCGCCTCCGAGCTCTCGCTGCATTTGGCAGGGAACCACGAGAGTGAGTTTCCACAGAGCGAGACCTGGAGCGGTCCAGATCCGGATCCGGATCCGAACAAAGAACTTGCAGATTTGGCGCATAGCAGGAAGCTACAAGCTGTGTTCTGTGGAAAGGGAGAAAAAGCGAAAGTTCAAAAGGGAGACAGTGATGCTGACAGTGATGATGGAAATGAATTATTGGAATTTGATTCTGCTAGAAACTCCTTTTCCCTAGCTCTGAGAGAATGCCAGGATAGGAGATCAAGATCTGATGCATTGTACAACAAGCATGATAGGAGAAGGCCTGCTTCATTGGATCTGAACAATGGCATTGCCACGGGATCTTCGCCTCGCCTTGGAGCTGTGAAAAAGAGTTCAGTTTCGTCTAGAAGGTCTGGTTCTGGCACTTTCCCTAGTCCCGGTACACCGAATTATCGGCAAGGTGGTGTTGCAATGCAAAAGGGTTGGTGCTCAGAGAGAGTTCCTTTGCATTCTAGTGCTGCGCGCAAGCAGGTTGGTGCGGCATTGTTGCCTCTCAGCAACGGCAGGACTTTGCCATCCAAGTGGGAAGATGCTGAGAGATGGATTCTGAGTCCTGTTTCAGGAGATGGCATGGGGAGAGTGCTCCCACAGCAGCAGAGGAGGCCCAAGTCAAAAAGTGGTCCACTTGGGCCACCTGGTATTGCATTTTACTCGATGTATTCACCTTCTGTGCCAATGTTTGAAGGCAGGAATGGAGGGAATTTTATTGCAGGTTCGCCGTTTTCTGCTGGTGTCATCTCAGCTGATGGATTAGCTGTCACTTCTGGTGGCCATGCTGGAGTGCTTCCGGGGAGAACGGATCCTTGTATGGCTCGCTCAGTTAGTGTCCATGGATGCTCTGAGATGCAGAGTCAGTCTTCAATGCCTCCCCAAGAGAATTTCGATTGTTTCAAAGATGCTGCCACCAATGTATCTCCGGAAGTTTCAAGGCGAGACATGGCAACACAGATGAGCCCAGAGGGTAGCTCATGCTCCTCTCCTAATATGAGGACTTCTTTCTCGGCCTCCACTCCACCTGTCCTGCCCATAACAGAATTGCAGAGTGTCTCATTCTCAAAAATGGATATCAGGGATGTGCAGGTAGATGAACGCGTTACAATGACAAGGTGGTCCAAGAAACACAGGGCTTTATTTTCTGGCAGAGGATCAGAAAATGTGGACCGCTGGAAAATGAAAGAAACAAGTTCTCAATCTTCATCTTTGGACAGTTCCGAAAGATCAAAGACTGCTTCAAAGGCTAAAAGGGAGGAAGCCAAAATCATTGCATGGGAGAACTTGCAAAAGGCAAAAGCTGAGGCAGCAATACGGAAACTAGAGATGAAGTTGGAAAAGAAGCGAGCATCCTCTATGGATAAGATCATGAACAAACTGAGGGTAGCTCAGAAAAAAGCTCAGGAAATGAGAAGTTCAGTTTCAACCAACCAGCCCCATCAGGTTGTCAGAACTTCGCACAGGGCACTGTTATTTCGTAGAACTGGCCAGATGAGTTCTCTTAGTGGTTGTTTCACATGCCATGCCTTCTAA 1869 0.4965 MPELGFHHHHHESAASWMRTRGRSRSRRSSSSSHTPASTRSTAALRGAAAAAAGDSTSPDSVIFTLESNLSFFSSASASVERCSFASDAHDRDSLASELSLHLAGNHESEFPQSETWSGPDPDPDPNKELADLAHSRKLQAVFCGKGEKAKVQKGDSDADSDDGNELLEFDSARNSFSLALRECQDRRSRSDALYNKHDRRRPASLDLNNGIATGSSPRLGAVKKSSVSSRRSGSGTFPSPGTPNYRQGGVAMQKGWCSERVPLHSSAARKQVGAALLPLSNGRTLPSKWEDAERWILSPVSGDGMGRVLPQQQRRPKSKSGPLGPPGIAFYSMYSPSVPMFEGRNGGNFIAGSPFSAGVISADGLAVTSGGHAGVLPGRTDPCMARSVSVHGCSEMQSQSSMPPQENFDCFKDAATNVSPEVSRRDMATQMSPEGSSCSSPNMRTSFSASTPPVLPITELQSVSFSKMDIRDVQVDERVTMTRWSKKHRALFSGRGSENVDRWKMKETSSQSSSLDSSERSKTASKAKREEAKIIAWENLQKAKAEAAIRKLEMKLEKKRASSMDKIMNKLRVAQKKAQEMRSSVSTNQPHQVVRTSHRALLFRRTGQMSSLSGCFTCHAF* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3839 622 Pfam Remorin, C-terminal region 509 612 IPR005516 -
Amo16g3839 622 MobiDBLite consensus disorder prediction 107 132 - -
Amo16g3839 622 MobiDBLite consensus disorder prediction 507 521 - -
Amo16g3839 622 MobiDBLite consensus disorder prediction 188 250 - -
Amo16g3839 622 MobiDBLite consensus disorder prediction 304 326 - -
Amo16g3839 622 MobiDBLite consensus disorder prediction 422 451 - -
Amo16g3839 622 Coils Coil 565 585 - -
Amo16g3839 622 MobiDBLite consensus disorder prediction 1 60 - -
Amo16g3839 622 MobiDBLite consensus disorder prediction 209 244 - -
Amo16g3839 622 MobiDBLite consensus disorder prediction 188 205 - -
Amo16g3839 622 MobiDBLite consensus disorder prediction 1 18 - -
Amo16g3839 622 MobiDBLite consensus disorder prediction 147 166 - -
Amo16g3839 622 PANTHER REMORIN FAMILY PROTEIN 122 620 - -
Amo16g3839 622 PANTHER OS02G0116800 PROTEIN 122 620 - -
Amo16g3839 622 MobiDBLite consensus disorder prediction 494 529 - -
Amo16g3839 622 Coils Coil 543 563 - -
Amo16g3839 622 MobiDBLite consensus disorder prediction 423 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3839 Amo-Chr16 150165338 150170427 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3839 16 150165338 150170427 Amo16g3839 16 150165338 150170427 ECH