Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3838 ATGTCTTGCAAGGAACTATTTGGTGGCACTTACCTCTTACTGAACCCTCAAGAGGCAACTCTTCTTGATCTTCTGAGACTCCTTTTTTCTTCTAAACTCCAAAACCGGAGTTTCATCGAATGTCCGGTGGACATTAAAGCAGAGGAATTCCGGCAAAGATGGCTCCTCTTCACCTCCATTGTCGCGCAAAAGCTTCTATTCACTTCAGGGAACACCATGAAAATGGTAGGAGGCAACTTGGAGTTGTGGCTCAATACACTTTCAAGCAATGGAGGATTTTTAGGGCTCTTCAAAAACAAACTAAAAGTATTAAAGAGAGGCTGTGGTGCAGGAAAGGTGATAACACCAGATGCATCATCAGCAACGTTCATGTCCGTGGCAGGGTTCCTTGACTACCGAGTTGACTTAGACAAAAGCATTCAAGATAAGAACGATGATGCAAAGTACAAAGCTTTGTTATCTATGATGGCTTCAAAGTTCTCCTACGAGAATGAAGAATACGTTGGAAACGCAATTAGAAATCATTGGCATATGAAGTTTTGGGGGTTATACAGTTTCTGGAACGATTTCCAAGAACTTTGGTCAACAAAAGCCATCATATTACAAGACACTAAGACCAAACCCAACTTGATTGTGGTTGCATTTAGAGGCACCCAACCATTTAATTCTGCCCAATGGATAACAGATGTAGATCTCTCATGGTATGAGCTTCCCAATGTTGGAAAGATCCATAGTGGGTTCATGAAAGCATTGGGCCTACAAAAAAATGGTGGGTGGCCCAAAGAGATAGATCAAACAAGCAAAAGTAATCATATTTATGCTTACTATACGCTTAGGGAGGAATTGAAAACAATGTTGCATGCAAATGAGGATGCAAAGTTCATAGTGACAGGGCATAGTTTGGGAGGGGCATTGGCAATTTTGTTTGCTGCAATTCTTACTTTGCATGAGGAGGCATGGCTTTTGGACAAGTTAGAAGGGGTTTACACATTTGGGCAGCCAAGGGTAGGGGACCAAGCATTTGGGGACTTCATGAAAGAGAGTATGAGAAAATATGATGTGAAATATAGGAGGTATGTTTATTGCAATGACTTGGTGCCTAGGATCCCTTATGAAGACAAAACCCTATTCTTTAAGCACTTTGGTCCTTCCTTATACTTCAACAGCTTGTACCAAGGGCAGGTTCTAGAGGAGGAGCCAAACAAGAATTACTTCTCTGTATTATGGGTCATACCCAAGATCTTAAACGCAGTTTGGGAGCTTGTGAGAGGATTCTTTCTCCCATTGGTTAAAGGCAAAGAATACAAAGACACTTGGTTGATGACACTGGCTAGGTTTGTTGGATTGATAATTCCAGGAGTATCAGCACATCTTCCCCCAGATTATGTCAATGTTACTCGACTGGGATCATTGCGAGAAATTCAGGATCTTTCCGTTTCAGAAACCTCAAAAACTGATTAA 1461 0.4148 MSCKELFGGTYLLLNPQEATLLDLLRLLFSSKLQNRSFIECPVDIKAEEFRQRWLLFTSIVAQKLLFTSGNTMKMVGGNLELWLNTLSSNGGFLGLFKNKLKVLKRGCGAGKVITPDASSATFMSVAGFLDYRVDLDKSIQDKNDDAKYKALLSMMASKFSYENEEYVGNAIRNHWHMKFWGLYSFWNDFQELWSTKAIILQDTKTKPNLIVVAFRGTQPFNSAQWITDVDLSWYELPNVGKIHSGFMKALGLQKNGGWPKEIDQTSKSNHIYAYYTLREELKTMLHANEDAKFIVTGHSLGGALAILFAAILTLHEEAWLLDKLEGVYTFGQPRVGDQAFGDFMKESMRKYDVKYRRYVYCNDLVPRIPYEDKTLFFKHFGPSLYFNSLYQGQVLEEEPNKNYFSVLWVIPKILNAVWELVRGFFLPLVKGKEYKDTWLMTLARFVGLIIPGVSAHLPPDYVNVTRLGSLREIQDLSVSETSKTD* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3838 486 Pfam Lipase (class 3) 212 373 IPR002921 GO:0006629
Amo16g3838 486 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 477 IPR044819 GO:0004806|GO:0006629
Amo16g3838 486 SUPERFAMILY alpha/beta-Hydrolases 151 405 IPR029058 -
Amo16g3838 486 CDD Lipase_3 148 388 - -
Amo16g3838 486 Gene3D alpha/beta hydrolase 138 413 IPR029058 -
Amo16g3838 486 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3838 Amo-Chr16 150157288 150165211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3838 10 471 Acyl Lipid Metabolism Gene Families AT1G56630 52.731 1.56e-178 508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3838 16 150157288 150165211 Amo16g3838 16 150157288 150165211 ECH