Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3818 ATGGACAACTCCACGCCTATGTTATCATGTTTGTTATTCTTGTTTTTGCAATGTGGCTTCTCTTCTTCAAACATGGACATCTTCATCCTTGCCGGACAAAGCAACATGGCTGGTCGTGGCGGCGTCAAAAACGGGAGGTTTTGGGACGGTAACGTCCCACCAGGGTGCCGGTCCAACCCTTCTATCTTGCGACTAAGTGCGAGTCTACAATGGGAAGAGGCCCATGAGCCTCTCCATTTAGACATCGACCTTGGCAAGACTTGTGGGGTTGGACCGGGTTTGGCATTCGCAAACGAAATTCTCAGGATCAAAGGTGAGAGTGTTAATGTGGTGATGGGTTTGGTGCCTTGTGCAAAGGGAGGGACTAAGATTGGGGAATGGAGTAAAGGAACAAGTTTGTACAATGAATTGGTGAGAAGGGCAATTGAGTCAGTGAAGGGTAATAGTGGAAGAACAATTAGGGCACTTTTGTGGTATCAAGGTGAGAGTGACACTGTTAGAGAAGAGGATGCTGAAGGTTATAGCCATAACATGGAGAAATTTATTATGGACCTTCGTTCTGATCTTCATCTTCCAAATCTTCTTGTTATCCAGGTAGCACTTGCATCAGGGGAAGGAAAATACATTGAGAAAGTGAGAAAGGGTCAATTAGGGTTGAAGCTTCCAAATGTGAAGTGTGTTGATGCAAAGGGTTTGCCCCTCAAAACAGATCAACTTCACCTTACTACAGTCTCTCAAGTTCACTTAGGAATGCGTTTGGCTCATGCCTATATTGCTTCCACCACTCATCATCATCATCATCATCAATTTATTAATCACTCACTCACAAGTTATGTAGCTAGTTAA 846 0.4421 MDNSTPMLSCLLFLFLQCGFSSSNMDIFILAGQSNMAGRGGVKNGRFWDGNVPPGCRSNPSILRLSASLQWEEAHEPLHLDIDLGKTCGVGPGLAFANEILRIKGESVNVVMGLVPCAKGGTKIGEWSKGTSLYNELVRRAIESVKGNSGRTIRALLWYQGESDTVREEDAEGYSHNMEKFIMDLRSDLHLPNLLVIQVALASGEGKYIEKVRKGQLGLKLPNVKCVDAKGLPLKTDQLHLTTVSQVHLGMRLAHAYIASTTHHHHHHQFINHSLTSYVAS* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3818 281 PANTHER OS06G0729725 PROTEIN 10 262 - -
Amo16g3818 281 Gene3D SGNH hydrolase 24 260 IPR036514 -
Amo16g3818 281 SUPERFAMILY SGNH hydrolase 25 265 - -
Amo16g3818 281 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 25 258 IPR005181 -
Amo16g3818 281 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 10 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3818 Amo-Chr16 149919772 149922948 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3818 16 149919772 149922948 Amo16g3818 16 149919772 149922948 ECH
Amo16g3818 16 149919772 149922948 Amo17g2841 17 130440531 130443586 PCT
Amo17g2841 17 130440531 130443586 Amo16g3818 16 149919772 149922948 PCT