Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3808 ATGGGAAAGCGTAATTCTCAACGGAAGAATGCTGCAGTATTGTTGGACAGTGATGATGAAGGTAGTGTGAGTTCATCATCGAGTGCCCGAACTGACAAAATGTCGGTGACAGGGAACGAAGAGGTGCACGTTGATCAGGAGACTCTGCTCGATCAAGCTCTTGATGCATTAGATGAGAAAAGGGGTTCTACAAGGGAGAAAGCTTTGTCAGTGATTATTGAGACATTTAATAGTAATATGCAGCATCAGTTTGTGGAGAAGAAATTTGCTACTTTATTACATTCTTGTCTTGCTTCAATAAAAAAAGGATCCAAAAAGGCATCTGCAAAGGAGATAGCATTGGCATCTCATGCAATCGGTCTTTTGGCCATTACTGTTGGTTGTGGTGATAATGCACGAGAAATATTTGAGGAATCAGTTAATACCCTGGATGAGTATCTTACATCTAAGTCAAACGCTACAAAAATTCCGCCTTTTCTGGAATGTTTGGCTATAATCACCTTTGTTGGTGGGAATGATGAAGAGGAAACTCAGAGATCAATGGACATATTGTGGAGAGTGATTCATCCCAAATTAGGTTCCAATGTAGTTGCGGCCAAACCTTCTGCTCCATTAATAACTGCCGTGGTATCTGCATGGTCCTTTCTCCTCTCTACCTTGAGTGAATTGAAACTGAATTCAAAATTTTGGCAAAGTTCCATATCTTATTTATCTAGTCTTCTAGAAAAGGAAGATCGGTCGGTACGCATTGCTGCTGGCGAAGCACTGGCTCTAATTTTCGATATTGGCAGCATACAGAAATTTTCTGCTGCATCTGAGAGCACAGGTGATATGACGCAAGAAGAGAGTAAAGTGCAGGAAAGTTACATACATTTACAAGGATTGAAAGGGAAGGTAAAAAATCAAGTTGAGAACCTTTCTGTTGAGGCCGGGGGAAAAGGTTCTGCTAAGAAAGATCTTAATACTCAAAGGAACTTGTTCCGAGATATCTTGGACTTTTTTGAGTATGGTGACTCTCCTGAAATTTCAATGAAGATTGGCGGTGATTCACTGCAGACATCATCTTGGTCCCAAATGATACAGTTGAACTATCTCAAGCACTTTTTAGGGGGAGGATTCATCAAGCATATGCAGGAAAATGAGTTCCTTCATGATGTTTTTAATTTCACCCCGAAGAAAAGATATCTTGGTGGCAATGAACCCCGAATGTCCAGTGGTGAAAAGAGAATGTTCAAGTCTCCAAATTCCGTTCAGAACAAAGCAAGGACTCAATTGCTTAATAAACAACGATTGTTATCTGAGGGTAGAAACTTAGGTCATTATGCAGCTAATGCAGGTGATGATGAAGCATGA 1353 0.4043 MGKRNSQRKNAAVLLDSDDEGSVSSSSSARTDKMSVTGNEEVHVDQETLLDQALDALDEKRGSTREKALSVIIETFNSNMQHQFVEKKFATLLHSCLASIKKGSKKASAKEIALASHAIGLLAITVGCGDNAREIFEESVNTLDEYLTSKSNATKIPPFLECLAIITFVGGNDEEETQRSMDILWRVIHPKLGSNVVAAKPSAPLITAVVSAWSFLLSTLSELKLNSKFWQSSISYLSSLLEKEDRSVRIAAGEALALIFDIGSIQKFSAASESTGDMTQEESKVQESYIHLQGLKGKVKNQVENLSVEAGGKGSAKKDLNTQRNLFRDILDFFEYGDSPEISMKIGGDSLQTSSWSQMIQLNYLKHFLGGGFIKHMQENEFLHDVFNFTPKKRYLGGNEPRMSSGEKRMFKSPNSVQNKARTQLLNKQRLLSEGRNLGHYAANAGDDEA* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3808 450 SUPERFAMILY ARM repeat 45 262 IPR016024 -
Amo16g3808 450 MobiDBLite consensus disorder prediction 398 419 - -
Amo16g3808 450 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 1 443 IPR039777 -
Amo16g3808 450 Pfam Interferon-related protein conserved region 380 430 IPR006921 -
Amo16g3808 450 Gene3D - 29 282 IPR011989 -
Amo16g3808 450 MobiDBLite consensus disorder prediction 19 35 - -
Amo16g3808 450 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 2-LIKE ISOFORM X1 1 443 - -
Amo16g3808 450 MobiDBLite consensus disorder prediction 1 39 - -
Amo16g3808 450 Pfam Interferon-related developmental regulator (IFRD) 24 335 IPR007701 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3808 Amo-Chr16 149761611 149767316 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3808 16 149761611 149767316 Amo16g3808 16 149761611 149767316 ECH
Amo16g3808 16 149761611 149767316 Amo08g0802 08 14159238 14162938 PCT
Amo16g3808 16 149761611 149767316 Amo17g2875 17 130875055 130879153 PCT
Amo08g0802 08 14159238 14162938 Amo16g3808 16 149761611 149767316 PCT
Amo17g2875 17 130875055 130879153 Amo16g3808 16 149761611 149767316 PCT