Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0790 ATGTATGTGCCTGTGGCTCATTCAGCCACACCTGAGGTTGGATTTCCTAATGAAAGTGGGATTTCCGTTGTGACTCTGGATCAAATTCCACGGTGGATTGATGCTGAGCAATCTGTGGGACATGATGATAATGGAGATTCATCATTTTCTAATCCGTACTTTCCGGATCCTTTGACTTCCCAATCAGAAGCCGACAGTGGTGGCATTGGCTCTGTGTCGAGGTTTCCTGTTGACAATGAAGTTAATTTGAAGATATACCTGTGGAGGGGAAATCCGTGGAACCTTGAGGTGGATGCCGTGGTCAATTCAACAAATGAGGTCATGGATGAAGCACACAGCAGCGCTGGGCTGCATGCTGCAGCTGGACCTGGTCTTGCAGAAGAGTGCGCAACTTTGGGTGGATGCCGAACGGGGATGGCTAAAGCTACCTGTGCATATGACCTTCCTGCAAGAAAAGTTATTCATACTGTTGGGCCAAAGTATGCCGTGAAGTACCACACTGCTGCTGAAAATGCTTTAAGTCATTGCTATCGGTCTTGCTTGGAGGTTCTAATTGAAAATGGCCTTCAAAGCATTGCTTTCGGCTGTATTTATACAGAGGCAAAGAATTATCCTCGTGAACCGGCTGCACATGTAGCTATAAGGACTGTTCGACGATTTCTCGAGAAGCAGAAAGACAACGTAACTGCTGTTGTATTTTGTACTACCAGTACAATGGATACCGAGATATATAAGAGGTTACTTCCACTTTACTTTCCACGGGATAAACATGAAGAGGAGGTAGCTTTGTTAAAGCTTCCTGCAGATGTTGGGGATGAGAATGGAGAGACTGTCATAGATGAGCGTAAAATCAGAATCAAGCCTTTACCTAAGAAACAAGTTCGAAGACCTCCTGAACCTCCAGCTGATGTTCCTGTTAGTGATATAGGCACAATTCGTAGGACTTCATCATATTTGGATTCATTTTTGGATCCTGCCTTCATGTCTTTGATTAAAGACCCTGATGAAAGACGTCTGGAGCAGTGGGAGAAAACTGTTAAAGCCCAAAATGGCTGGAATTTTACTAAATTTCTTGGACTTGGCGAGCTTGGTGGACCTCCATTGTCTGCTGCCGAAGAATATTCTCTACACTCAAGATATCTTTCTAAAGCAAATTCCTTAAATCTTTCTGAAATAGCAGAGATGAAAATTATCTACCGTGGAGGTGTAGACAGTGAGGGTCGTCCTGTCATGGTTGTTGTGGGGGCTCACTTTTTGCTCAGATGCCTTGATTTGGATCGATTTGTGCTCTACGTTGTGAAGGAGTTTGAGCCTATAATACAGAAGCCGTATACTATTGTCTACTTCCACTCTGCTGCATCACTACAGATGCAACCAAACTTAGGATGGATGAGAAGATTACAACAAATACTTGGTCGGAAGCACCAGCGGAACCTACATGCGGTATATGTCCTTCACCCATCTTTGGGGCTAAAAGTAGCTGTATTTGCGCTCCAGTTGCTCGTGGACAATATGGCATGGAAGAAAGTGGTATATGTTGATAGACTATTGCAGCTCTTCCGATACGTCCCTCGTGAGCAATTGACCATTCCAGATTTTGTGTTCCAGCATGATTTAGAAGTGAATGGAGGAAAGGGTCTCATGGTAGATCCAAGAACAAAGTATGTTTATCACAGACCATGA 1683 0.4403 MYVPVAHSATPEVGFPNESGISVVTLDQIPRWIDAEQSVGHDDNGDSSFSNPYFPDPLTSQSEADSGGIGSVSRFPVDNEVNLKIYLWRGNPWNLEVDAVVNSTNEVMDEAHSSAGLHAAAGPGLAEECATLGGCRTGMAKATCAYDLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCLEVLIENGLQSIAFGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDNVTAVVFCTTSTMDTEIYKRLLPLYFPRDKHEEEVALLKLPADVGDENGETVIDERKIRIKPLPKKQVRRPPEPPADVPVSDIGTIRRTSSYLDSFLDPAFMSLIKDPDERRLEQWEKTVKAQNGWNFTKFLGLGELGGPPLSAAEEYSLHSRYLSKANSLNLSEIAEMKIIYRGGVDSEGRPVMVVVGAHFLLRCLDLDRFVLYVVKEFEPIIQKPYTIVYFHSAASLQMQPNLGWMRRLQQILGRKHQRNLHAVYVLHPSLGLKVAVFALQLLVDNMAWKKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGLMVDPRTKYVYHRP* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0790 560 MobiDBLite consensus disorder prediction 37 71 - -
Amo15g0790 560 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 540 - -
Amo15g0790 560 Pfam Divergent CRAL/TRIO domain 407 538 IPR001251 -
Amo15g0790 560 SUPERFAMILY Macro domain-like 82 281 IPR043472 -
Amo15g0790 560 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 1 540 - -
Amo15g0790 560 CDD Macro_GDAP2-like 84 251 IPR035793 -
Amo15g0790 560 SUPERFAMILY CRAL/TRIO domain 389 528 IPR036865 -
Amo15g0790 560 SMART sec14_4 388 537 IPR001251 -
Amo15g0790 560 MobiDBLite consensus disorder prediction 42 68 - -
Amo15g0790 560 Gene3D Leucine Aminopeptidase, subunit E, domain 1 17 257 IPR043472 -
Amo15g0790 560 CDD SEC14 395 531 IPR001251 -
Amo15g0790 560 Pfam Macro domain 101 213 IPR002589 -
Amo15g0790 560 Gene3D - 390 541 IPR036865 -
Amo15g0790 560 ProSiteProfiles Macro domain profile. 72 252 IPR002589 -
Amo15g0790 560 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 388 534 IPR001251 -
Amo15g0790 560 SMART YBR022w_8 84 213 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0790 Amo-Chr15 54128353 54135582 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0790 15 54128353 54135582 Amo15g0790 15 54128353 54135582 ECH