Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0783 ATGAGAGAACACGAAGCAAGAATGGAGGTGGAAGTAGACACTCCAGAAGACAAGGACCTCTTCAAAGCTGCTGAAAATGGCGACGCCTCAACCTTCCGATCTCTCTCGTCTAAAGCACTCTCAAAAGCGCTCTCCCTCACCAACGAAGACCATCGCTCTCTTCTTCACGTTGCCGCTTCTTCCTCTCACACCGAGGTGGTGAAGATACTGTTATCTGCTGATGCATCAGCTAGTGTGATAAACAATAAAGATGAAGAAGGTTGGGCGCCCATTCACTCTGCGGCTAGCATTGGGAATTTGGAGATTGTGGAGGCATTGTTGAGCAAAGGAGCTGATGTTAATTTAAAAAATGATGGGGGTCGAACTGCTCTACATTATGCTGCCAGCAAAGGTTGGGTGAAGATTGCTGAAAAACTCATCTCCAATGATGCCAAGATTAATATAAAGGACAAGGTTGGTTGCACCCCATTGCATAGGGCAGCAAGTACTGGGAATTCTGAGTTGTGTGAACTTCTAATTGAAGAAGGTGCGGAGGTTGATGCAGTTGATAGAGTTGGTCAAACTCCTTTAATGAATGCTGTGATTTGCAATAACAAGGAGGTAGCACTCCTTCTGATAAGACATGGAGCTGATGTTGATGTGGAGGACAAGGAAGGGTACACGGTGCTTGGTCGTGCCATGGATGACTTTCGGTCTGTACTGATAGATGCTGCTAAGGCCATGCTTGAGTTATGTAACTAA 741 0.4588 MREHEARMEVEVDTPEDKDLFKAAENGDASTFRSLSSKALSKALSLTNEDHRSLLHVAASSSHTEVVKILLSADASASVINNKDEEGWAPIHSAASIGNLEIVEALLSKGADVNLKNDGGRTALHYAASKGWVKIAEKLISNDAKINIKDKVGCTPLHRAASTGNSELCELLIEEGAEVDAVDRVGQTPLMNAVICNNKEVALLLIRHGADVDVEDKEGYTVLGRAMDDFRSVLIDAAKAMLELCN* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0783 246 ProSiteProfiles Ankyrin repeat region circular profile. 86 118 - -
Amo15g0783 246 ProSiteProfiles Ankyrin repeat profile. 86 118 IPR002110 GO:0005515
Amo15g0783 246 ProSiteProfiles Ankyrin repeat region circular profile. 119 151 - -
Amo15g0783 246 ProSiteProfiles Ankyrin repeat profile. 119 151 IPR002110 GO:0005515
Amo15g0783 246 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 153 226 - -
Amo15g0783 246 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 80 178 - -
Amo15g0783 246 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 44 150 - -
Amo15g0783 246 SUPERFAMILY Ankyrin repeat 17 227 IPR036770 -
Amo15g0783 246 ProSiteProfiles Ankyrin repeat region circular profile. 152 184 - -
Amo15g0783 246 ProSiteProfiles Ankyrin repeat profile. 185 217 IPR002110 GO:0005515
Amo15g0783 246 SMART ANK_2a 86 115 IPR002110 GO:0005515
Amo15g0783 246 SMART ANK_2a 185 214 IPR002110 GO:0005515
Amo15g0783 246 SMART ANK_2a 152 181 IPR002110 GO:0005515
Amo15g0783 246 SMART ANK_2a 50 79 IPR002110 GO:0005515
Amo15g0783 246 SMART ANK_2a 119 148 IPR002110 GO:0005515
Amo15g0783 246 PRINTS Ankyrin repeat signature 153 168 IPR002110 GO:0005515
Amo15g0783 246 PRINTS Ankyrin repeat signature 201 215 IPR002110 GO:0005515
Amo15g0783 246 ProSiteProfiles Ankyrin repeat region circular profile. 185 217 - -
Amo15g0783 246 Pfam Ankyrin repeat 120 148 IPR002110 GO:0005515
Amo15g0783 246 ProSiteProfiles Ankyrin repeat profile. 152 184 IPR002110 GO:0005515
Amo15g0783 246 Gene3D - 11 124 IPR036770 -
Amo15g0783 246 Pfam Ankyrin repeats (3 copies) 20 117 IPR002110 GO:0005515
Amo15g0783 246 Pfam Ankyrin repeats (3 copies) 153 216 IPR002110 GO:0005515
Amo15g0783 246 Gene3D - 125 244 IPR036770 -
Amo15g0783 246 ProSiteProfiles Ankyrin repeat profile. 50 82 IPR002110 GO:0005515
Amo15g0783 246 ProSiteProfiles Ankyrin repeat region circular profile. 50 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0783 Amo-Chr15 53751558 53754932 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0783 15 53751558 53754932 Amo15g0783 15 53751558 53754932 ECH