Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0647 ATGTTGAATCATCATCACTTTCATCCTCATCCATATCATCATCATCAGATGGAGAATTACCCAAGAGATCTACTTCAGAGATTCGTTGACGTGTCAACTAGTGCTGGTAACACTAGTGAAGATATCACACAAATACAACAAGAACAACAGCATCATCAGCAAGCTAAAGAGTATGTAGAAGAAAAAGAAGCAGAAGATGCCGATGAAGAAGTTGAGCTGAACCTAGGTCTCTCTTTAGGGGGTAGATTCGGCGTTGACAAGGACGCAAAGAAGAAGCTCACGCGCTCTTCTTCAATAGTTGGTACAATGCCTCTTTTCCGGGAAGACCGGCCGACGGAGCCGTCACATGTGGCAGCGTATCCAGCGGCGCTGATGAGGACATCATCACTGCCGACGGAGACTGAGGAGGAGTGGAGGAAGAGGAAGGAATTGCAGACTTTGCGGCGGATGGAGGCCAAGAGGAGGAGATCCGAGAAGCAGAGAGTTGTGCGGTCGGAGAAGGAATCCGGTGGTGGCGCCGGAGCCGGAATCGGTAGTGGTTTGGAAGAATTGGAGGGTGGTGCAGGTGCAAGTGCAACAACAATGGGTTTGAATAGATTCGGTTCTTCAAATTTGGCGGCACAACCTTTTGGGGTGCCAAATTGGGGTGCAAGGCAAGTGGTTCTTGGTGATGTTTTGGGAAAAGGGAAAATTGGTGATAGTGGCGGCTTTCAGGGTTTGTTTGCACAACCTTCTTCTCAATGTTCTGCAGAATCTCAAGGGGGAAGTTCCTCATCAGTGTCTGAAATGGAGAGCAAGCCTTTTCTAGGACGGAGCAGTTGTGGTGAAGCTAGAAGCCCTGCTAGTAATCAGTCCTTACAGGAACGAAGAAGCAGTCAGGATGCTGTTGGGGGTTCAGGGGCGAAGACAAACGAGAATGTGAGCAGAAGTTCCAGAGCTGAGATGGATAATCCATCTAAGAAACCGAACAAGGCGAGAGAAATTGGGACAAATTCAATGGAAGACATGCCTTGTGTATTTACAAAAGGGGATGGCCCTAATGGAAAAAGGATAGAGGGTATCTTGTACAAATATGGTAAAGGAGAGGAAGTGAGGATAATGTGTGTGTGCCATGGAGATTTTCTCTCCCCAGCAGAGTTTGTTAAGCATGCTGGTGGTGGTGATGTTGCTCACCCACTAAGGCACATTGTTGTAAACCCTTCTGCTGCTCCTTTTTTGTGA 1221 0.4775 MLNHHHFHPHPYHHHQMENYPRDLLQRFVDVSTSAGNTSEDITQIQQEQQHHQQAKEYVEEKEAEDADEEVELNLGLSLGGRFGVDKDAKKKLTRSSSIVGTMPLFREDRPTEPSHVAAYPAALMRTSSLPTETEEEWRKRKELQTLRRMEAKRRRSEKQRVVRSEKESGGGAGAGIGSGLEELEGGAGASATTMGLNRFGSSNLAAQPFGVPNWGARQVVLGDVLGKGKIGDSGGFQGLFAQPSSQCSAESQGGSSSSVSEMESKPFLGRSSCGEARSPASNQSLQERRSSQDAVGGSGAKTNENVSRSSRAEMDNPSKKPNKAREIGTNSMEDMPCVFTKGDGPNGKRIEGILYKYGKGEEVRIMCVCHGDFLSPAEFVKHAGGGDVAHPLRHIVVNPSAAPFL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0647 406 MobiDBLite consensus disorder prediction 242 266 - -
Amo15g0647 406 Coils Coil 45 65 - -
Amo15g0647 406 Pfam Putative nuclear localisation signal 124 265 IPR032310 -
Amo15g0647 406 MobiDBLite consensus disorder prediction 149 166 - -
Amo15g0647 406 Pfam Ethylene-responsive binding factor-associated repression 67 101 IPR012463 -
Amo15g0647 406 MobiDBLite consensus disorder prediction 276 313 - -
Amo15g0647 406 MobiDBLite consensus disorder prediction 35 54 - -
Amo15g0647 406 Coils Coil 140 160 - -
Amo15g0647 406 MobiDBLite consensus disorder prediction 149 182 - -
Amo15g0647 406 Pfam Tify domain binding domain 364 398 IPR032308 -
Amo15g0647 406 PANTHER AFP HOMOLOG 2 17 403 IPR031307 GO:0007165
Amo15g0647 406 PANTHER NINJA-FAMILY PROTEIN AFP1 17 403 - -
Amo15g0647 406 MobiDBLite consensus disorder prediction 242 328 - -
Amo15g0647 406 MobiDBLite consensus disorder prediction 35 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0647 Amo-Chr15 42489483 42493534 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0647 15 42489483 42493534 Amo15g0647 15 42489483 42493534 ECH