Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g4055 ATGGTCTTCCCTTCTCTTCCAATCTATCTTGATCCACCCAACTGGTCACAACAGGGTAATCAGCAATTAGGAATTGGCTCTCAAAATCTTCCAGTTCCGCCAATTTTACAGCCACCACCTCCAACGACTGCAGTAGTCGTTGGAGGTGGTGGCTACCAGGGCTCTATTCGTCCAGGATCAATGGCGGATAGAGCCAGGCTGGCAAAGATACATCAACCAGATGTATCACTCAAGTGTCCGAGGTGCGAATCCACGAACACCAAGTTCTGTTACTACAACAACTACAGCCTCTCGCAGCCTCGCCACTTCTGCAAGACTTGCCGCCGGTACTGGACGAGAGGCGGCGCACTGAGGAATGTTCCGGTTGGCGGCGGATGCAGAAGGAACAAGAGAAGCAAAGGAACAACAAACTCCAACACCAACAGATCTAGGTCTCCTTTGAAACCTGATCATCATCATCATCATCTTAATCTGCATGGTGGTGCAGTTGGAGGTTCTAGCTCCGCAAGTGGCAACTCTTCTTCCAGTGGCCGCAATAATAGTAACAGCAACAACAACAACAATGATCTGAATGTGATGAATCATATGCAAACTCCACCACCAACCCATCATCATCATCATCAATTTCCGTTCTTGCCAACAACAACTTTGCATCACTATAGTAGTGATCATGCATCATCACTTCTTTTTGGCCCAAACCCTCCTCCATCTTCTTTGTTGGTTAGAAATGGTGGCAACACAGGTAGTGATGGCGAGTTTCAAATTGGAGCTAATAACAATAACAATGGTGGTTCTGTGTTACAGCAATGGAGGCTACCAAGTTTGCAACAGTTTCCTAATTTCTTGAGTAATTTGGAACCGCCACAACCACAACCGCAACCGCCACAAATCGGTTTGTTTCATCAATTTGATCAAGAAAATGGTGAATATGTGAGGGACCATCATGGAGGTAGGTTTCGTTGTTCTAGTAATAGTAACATTAATAAGACAATGGCTGATGATTCTGGTGTTGTCGTTGTTGGTGGAATGATACCTCATCATCAGGTTAACAATAATTCGGTGAAAATGGAAGAGAATAATAATAGTAAAAATAATAATCAAGGAGGGTTGAGTTTATTTTCTAAGAATAATGTTTTGGGTAGCAATGATCTATTTTGGAGTAGTAGTAATGGTGGAAGTGGCAATGTTAATGCATGGAATGAAGCTCCTAGTTTCGCTTCCCCGACAAATCAGTTATTGTGA 1242 0.4364 MVFPSLPIYLDPPNWSQQGNQQLGIGSQNLPVPPILQPPPPTTAVVVGGGGYQGSIRPGSMADRARLAKIHQPDVSLKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGTTNSNTNRSRSPLKPDHHHHHLNLHGGAVGGSSSASGNSSSSGRNNSNSNNNNNDLNVMNHMQTPPPTHHHHHQFPFLPTTTLHHYSSDHASSLLFGPNPPPSSLLVRNGGNTGSDGEFQIGANNNNNGGSVLQQWRLPSLQQFPNFLSNLEPPQPQPQPPQIGLFHQFDQENGEYVRDHHGGRFRCSSNSNINKTMADDSGVVVVGGMIPHHQVNNNSVKMEENNNSKNNNQGGLSLFSKNNVLGSNDLFWSSSNGGSGNVNAWNEAPSFASPTNQLL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g4055 413 MobiDBLite consensus disorder prediction 118 209 - -
Amo14g4055 413 MobiDBLite consensus disorder prediction 163 198 - -
Amo14g4055 413 MobiDBLite consensus disorder prediction 130 144 - -
Amo14g4055 413 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 7 378 IPR045174 GO:0003700|GO:0006355
Amo14g4055 413 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 7 378 - -
Amo14g4055 413 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Amo14g4055 413 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
Amo14g4055 413 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g4055 Amo-Chr14 146457838 146459935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g4055 1 133 C2C2-Dof Transcription Factor Family AT2G37590 52.830 1.27e-43 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Amo14g4055 zf-Dof 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g4055 - - adu:107486952 676.011