Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5622 ATGAAGAGGGTTCATCACAGGAATCATCAGGAGCAGAAGAAATGCCCTTCCATAATAATGATGCGCCTCGCCGGTTTGTGCGTCTTCTCCACAATCATCCTCTCCGTCGTCTTCTCCCTCTCCCTCGTCCTTCGAGATCCTCCCTCCGACGCCGTCCCCATATCTGTGCCCCGTTGGATTGACGATAAGCTGCTTGCTGGTCTTCTACCTGCTGGATTCGATGAAACCTCTTGTCTAAGCAGATATGATTCGCTCATTAACCGCAAAGGATTATCAGCAAAACCTTCTTCATACCTCATTTCTAGATTAAGAAAATATGAAGCGCTCCACAGAGAATGTGGACCTTATACTCAATCCTACAATAAAACAGTGAAAGATCTGAGGTCCGGTGTTCCAAGCCAGTCATCTTCGGCTGCTTGTAAATATCTAGTGTGGATTTCATACAGCGGTTTAGGGAATAGGATATTGACCATTGCTTCTGCATTCCTTTATGCTCTCCTCACCAACCGTGTTCTCTTGCTTGATCCGGGACTTGACATGACTGATCTCTTTTGCGAGCCCTTCCCACACGCTTCCTGGTTCCTTCCTCCCGATTTCCCTCTTCGTGCTCAATTCCATCATCTCAATCAGAAATCTGCTCACTGTTATGGGAAAATGATCAAGGATAAATCAGTTACAGCATCTTTTGTGTACCTTCATCTAGCGCATGACTACGACGATCAAGATAAGCTATTCTTCTGCGATGAAGACCAACGTTTTCTTGATCAGGTACCTTGGTTATTAGTCAGAACAGATAATTACTTCGTTCCGTCGCTATTCTTGATGCCGTCTTTTGAGCAGGAACTGAATCAGCTGTTTCCAAATAGGGAAACAGTTTTCCATTTCTTAGCTAGGTATCTGTTCCACCCCACAAATAGAGTATGGGGACTAGTCATTAGATACTATGAAGCTTATTTAGCTAATGTGGATGAGAGAGTAGGTATACAGATTAGAGTGTTTGACACCGGAACAGGTCCATTTCAACATGTATTGGATCAGATCTTAGCTTGTGTTTTCAAGGAGAATCTATTACCCGATGTTAACAGGAAGCAGGCTACTATTAGTTCATCAGGAAAGCCGAAGTCGAAAGCAGTACTCATGACATCCTTAAGCTCTGGTTATTCCGAAAAGGTCAGAGATATGTACTGGGAATTTCCCACCACGACGGGAGAAGCAGTTGGCGTTTTCCAGCCAAGCCATGAAGGATATCAACAAACTGAGAATCAGATGCACAACCAAAAAGCTTGGGCAGAAATGTACCTCTTAAGCTTAACCGACGTGTTGGTTACTAGCTCATGGTCTACTTTCGGCTATGTGGCACAGGGACTGGGAGGTTTAAAACCATGGATACTATACAAGCCTGAGAATAAAACAGCTCCAGATCCTCCTTGTCAACGTGCTATGTCGATGGAGCCATGTTTCCATGCTCCTCCCTTTTATGACTGCAAGGCTAAGAAAGGAATTGACACTGGTAAACTTGTTCCACATGTTAGGCACTGTGAGGATATGAGCTGGGGTCTTAAGCTTGTACATAACTATGCGTAG 1584 0.4432 MKRVHHRNHQEQKKCPSIIMMRLAGLCVFSTIILSVVFSLSLVLRDPPSDAVPISVPRWIDDKLLAGLLPAGFDETSCLSRYDSLINRKGLSAKPSSYLISRLRKYEALHRECGPYTQSYNKTVKDLRSGVPSQSSSAACKYLVWISYSGLGNRILTIASAFLYALLTNRVLLLDPGLDMTDLFCEPFPHASWFLPPDFPLRAQFHHLNQKSAHCYGKMIKDKSVTASFVYLHLAHDYDDQDKLFFCDEDQRFLDQVPWLLVRTDNYFVPSLFLMPSFEQELNQLFPNRETVFHFLARYLFHPTNRVWGLVIRYYEAYLANVDERVGIQIRVFDTGTGPFQHVLDQILACVFKENLLPDVNRKQATISSSGKPKSKAVLMTSLSSGYSEKVRDMYWEFPTTTGEAVGVFQPSHEGYQQTENQMHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENKTAPDPPCQRAMSMEPCFHAPPFYDCKAKKGIDTGKLVPHVRHCEDMSWGLKLVHNYA* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5622 527 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 60 525 - -
Amo13g5622 527 PANTHER FUCOSYLTRANSFERASE 2-RELATED 60 525 IPR004938 GO:0008107|GO:0016020|GO:0042546
Amo13g5622 527 Pfam Xyloglucan fucosyltransferase 61 496 IPR004938 GO:0008107|GO:0016020|GO:0042546
Amo13g5622 527 Gene3D - 137 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5622 Amo-Chr13 158090624 158092908 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5622 12 523 Xyloglucan Fucosyltransferase1 AT2G03220 61.394 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5622 K13681 - gmx:100803305 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5622 13 158090624 158092908 Amo13g5622 13 158090624 158092908 ECH