Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5448 ATGTGGCCTATATTAGTGGTTAATAAGATTCTCAAGAAGAGGTTAGGAAGCACCAACTTTGTTGCTGATTATCATCATACTTATGAGCAACCCTTGTTGTCCATTGATCAACAATCCATTCATCATCATCCAGATTACAACAAGTACAACTACAAGGTTTTTGTTAGCACGTGGAACGTAGGTGGGGTTGCACCACACCAAGATTTGAACTTGGAGGATTTGTTGGACACATGCAACAACTCCTGTGACATCTATGTACTAGGGTTTCAAGAAATAGTGCCTCTGAAGGCATCAAACGTTCTGGGATCAGAAAACAGCGAGGTTTCTAGCAAATGGAATTCCTTAATCAGGGAAGCTCTGAACAAGAAGACAGAAAATGATGATGAGTGGAAAGGAGGCCCACAGGAATTCCAGTGTATCATAAGCAAGCAAATGGTTGGTGTGTTCATATCTGTGTGGACAAGGAAAGATCTTCGCCCTTTCATTCACCATCCAAGTGTCTCTTGTATTGGATGTGGCATCATGGGCTGCTTAGGAAACAAGGGATCGGTGTCAGTGAGATTTCGGTTACATGAAACAAGCTTCTGCTTTGTGTGCAGCCATCTTGCATCAGGGGGAAGAGAAGGAGATGAGAAGCACAGAAACTCTAACGTTGCAGAAATATTTTCCCGGACAACTTTTCCCAAAGGCCCTTTGTTTGATTTGCCAAGAAAGATTCTTGATCATGACCATGTAGTATTGCTAGGAGATCTAAATTATAGAATTTCTCTACCAGAAGAATCAACACGGTTACTTGTTGAAAAAGGAGACTGGGATTCCTTATTACAAAATGATCAGCTAATGATGGAGCTAGAGAACGGAAACATGTTAAGAGGGTGGCATGAAGGGCCAATCAAATTTGCTCCAACATACAAGTATTTTCCAAATTCAGATATGTATTATGGATGTTGTTATCATGGGAAAAAAGCAGAAAAGAAGCGAGCACCAGCATGGTGTGACCGAATAGTGTGGTATGGAAATGGTTTAAAGCAACTTGTGTACAATAGAAGTGAGTCAAAACTATCAGACCACAGGCCTGTGAAGGCAATATTCATAGCACAAGTGAGGGTTTCAACAGAGCTAAGAAATTTGCAAACCTTGTTTCTATCAGAAAGATTTGAACACATTAAAACTCCTTTTGGAGTTTCTACAACCAATGATGATTTTCTATGTAAAAAACAACTGAGTTTCCGGTTGTGA 1239 0.4027 MWPILVVNKILKKRLGSTNFVADYHHTYEQPLLSIDQQSIHHHPDYNKYNYKVFVSTWNVGGVAPHQDLNLEDLLDTCNNSCDIYVLGFQEIVPLKASNVLGSENSEVSSKWNSLIREALNKKTENDDEWKGGPQEFQCIISKQMVGVFISVWTRKDLRPFIHHPSVSCIGCGIMGCLGNKGSVSVRFRLHETSFCFVCSHLASGGREGDEKHRNSNVAEIFSRTTFPKGPLFDLPRKILDHDHVVLLGDLNYRISLPEESTRLLVEKGDWDSLLQNDQLMMELENGNMLRGWHEGPIKFAPTYKYFPNSDMYYGCCYHGKKAEKKRAPAWCDRIVWYGNGLKQLVYNRSESKLSDHRPVKAIFIAQVRVSTELRNLQTLFLSERFEHIKTPFGVSTTNDDFLCKKQLSFRL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5448 412 Pfam Endonuclease/Exonuclease/phosphatase family 57 357 IPR005135 GO:0003824
Amo13g5448 412 SUPERFAMILY DNase I-like 47 369 IPR036691 -
Amo13g5448 412 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 388 - -
Amo13g5448 412 SMART i5p_5 49 372 IPR000300 GO:0016791|GO:0046856
Amo13g5448 412 Gene3D Endonuclease/exonuclease/phosphatase 34 390 IPR036691 -
Amo13g5448 412 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 388 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5448 Amo-Chr13 155376251 155379232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5448 50 375 Acyl Lipid Metabolism Gene Families AT1G65580 29.333 4.45e-38 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5448 13 155376251 155379232 Amo13g5448 13 155376251 155379232 ECH