Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5430 ATGGCGGCAGTCACAGCATCGGTGATTGCTTACAAGCTCTTGGAAGAACCACAACCTTTTTCCCTTGCTGATGTTGCTGCTGCTGCTGTTGCTGCTGATGTTTCTTCTCCGTCTCCTTCTTCTTCTTCTTCTGGTAATTTTGCAGAGACTGGGAATCCATCTGATGCGGTCGTCTTCTTTGGTATCAGTATGGTACTTGGGATTGCATGCAGGCACCTCCTCCGCGGCACCAGAGTCCCTTACACTGTTGCCTTGCTCATCATTGGCATTGCCCTTGGTTCCATAGAGTATGGTACTCATCATCGGCTGGGAAAGATTGGAGATGGAATTCGTATTTGGGCAGAGATTAATCCAGAACTTCTGCTGGCCGTTTTTCTTCCTGCTCTCCTTTTTGAGAGCTCATTCTCAATGGAAGTTCACCAAATCAAGAGGTGTATTGCTCAAATGATCTTACTAGCTGGTCCTGGAGTTGTGATTTCAACCTTTTGTCTTGGAGCTGTTTTGAAGCTAACTTTTCCTTATAATTGGAGTTGGAAAACATCACTATTGCTTGGGGGACTTCTGAGCGCAACTGATCCTGTTGCAGTTGTAGCTTTGTTGAAGGAGCTCGGTGCCAGTAAAAAACTAAGCACAATAATTGAAGGCGAATCCTTGATGAATGATGGGACGGCTATTGTGGTTTATACTTTATTCTATCGGATGGTTCTTGGTAGCACCTACAATTGGGTTGATGTTATCAAATTTCTAGTGCAAGTCTCATTTGGAGCTGTAGGAATTGGTGTTGCTTTTGGGATAGCATCTGTTTTATGGCTTGGGTTTATTTTTAATGATACAGTGATAGAGATTTCCCTTACACTTGCCGTTAGCTACATTGCTTACTTCACTGCTCAAGAGGGTGCTGATCTATCTGGTGTTTTGACTGTCATGTCGTTGGGAATGTTCTATTCTGCATTTGCAAGGACAGCTTTTAAGGGTGAAAGTCAACAAAGTTTACATATCTTTTGGGAAATGGTTGCATATATTGCTAATACATTAATTTTCATCTTGAGTGGAGTTGTTATAGCTGAAGGAGTACTTGGTGATGACAATGTCTTCCATCATGGAACATCATGGACCCACCTCTTGCTTCTCTATGTTTATGTTCAAGTGTCGAGATGCATCGTAGTTGGTGCATTATTTCCCTTGCTAAGGTATTTTGGATATGGCTTGGATTGGAAAGAAGCTAGTATTCTAATCTGGTCAGGATTGCGAGGGGCAGTTGCCTTGTCACTTTCATTATCAGTCAAGCGTTCGAGTGGTCGATCACTTGAATTGACTCCAGAGACAGGAACACTGTTTGTTTTCTTCACTGGTGGTATTGTGTTTTTAACACTTATAGTGAATGGTTCGACAACACAGTTCGTTTTACACTACCTTGACATGGACAAGTTAACAGCTGCAAAGAAACGTATCCTTGATTTCACAAAGTATGAAATGTTGAACAAAGCACTAGAAGCTTTTGGTGAACTTGGAGATGATGAGGAACTAGGGCCTGCTGATTGGGCCACAGTGAAGAGATATATCTCCTGCCTAAATAACATTGAAGGTGAACGTGTTCATCCTCACGGCACATCTGAAAGTGATACTAATCTGGATGCTATGAATTTGAAAGACATACGAGTACGCCTTCTCAATGGTGTCCAAGCTGCTTACTGGGAGATGCTTGATGAAGGACGAATTTCTCAAACGACAGCTAATATTCTAATGTTATCTGTGGAGGAGGCAATAGATTTGGCTTCACATGAGCCTCTATGTGACTGGAAAGGCTTAAAAACTAATGTTCACTTTCCAAATTACTACAAGTTTCTTCAGTCTAGTATGCTTCCACCAAAATTAGTTACATACTTCACTGTGGAAAGGTTGGAATCTGCTTGTAATATTTGTGCTGCGTTTCTTCGTGCACACAGAGTTGCTCGACAACAATTACATGACTTCATAGGTGAAAGTGATGTTGCTTCTGCTGTTATCAATGAAAGCATTGCAGAAGGCGAAGAAGCACGGAAGTTCCTGGAGGATGTTCGTGTAACATATCCTCAGGTCTTAGGAGTTGTGAAAACAAGGCAAGCCACATATGTAGTGCTAAATCACTTAATTGAATATGTTCAAGACCTTGAGAAGGCTGGGATTTTGGAGGAGAAAGAGATGTTGCATCTGCATGATGCTGTCCAGACTGATTTAAAGAAATTACTCAGAAATCCTCCTTTGGTGAAGCTTCCTAAAATAACTAGTATGCATCCTATGTTGGGCGCTCTGCCTTCTCCGGTTCGTGAATCACTTATAAGTGGTACCAGGGAAATGATGAAATTGCGTGGCTTGACACTATACAAGGAAGGATCAAGATCAAATGGAATTTGGTTAATTTCTAATGGAGTGGTAAAGTGGGAAAGCAAGGTGATAAGAAACAAGCACTCTTTCAATCCAACTTTCTCACACGGGATCACGTTGGGTCTTTACGAAGTGCTGACAGGAAGGCAGTATATCTGTGATGTCCTCACAGATTCCGTGGTGTTCTGTGTCTTCATCGAAGCCGACAAGATAGTTTCATGCCTTGGATCAGACCCTTCCGTGGAAGACTTCCTGTGGCAGGAAAGTGCTATTTTCCTTTCCAAAGTATTGCTTCCCCAGATATTTGAGAAAATGTCTATGCAAGAACTAAGAGCCATGATTGCTGAAAGATCACAAATGACAATATACATAAGAGGAGAGACAATAGAAATACCTAATCATTCGGTCGCATTCTTGCTAGAAGGATATGTCAAAACTCAAGCTCGTCAAGAACTGGTAACAGCACCAGCAGTCCTGCTCTCTTCCCAAGGGAATCTAAGCTTCCACAGTTTGTCAAGTTCAGGTATCAGGGAAAGTAGTTTTTCTCATCAAGGATCGTCTTATCTAGTTGAAGCTAGAGCAAGGGTAATCATATTTGACATTGCAGCATTTGAGGCTGATTCTCCTCCTGCTAGAAGATCAAATTCGTTATTATCACATTCCATGGAACATCCCCATAGAACCTTACGTAGCAGAGAACACAGCGGTCTTATGAGCTGGCCTGAAAACTTCTACAAGCAGAAGCCCCATCGGCACAATTCCGAAGGGAACGGCCGACAAATAACTAATTTGTCTGCAAGAGCAATGCAGTTGAGCATCTACGGAAGCATGGTGGAATTACGGATCCCTGGCCGGAGCCGAAGTTCGACGAGCAATCAGACTAAACCGGCTCTTAGTTTGTCATACCCAAGCATTGTGCCACAACAGGGGCGTCCGCTTTTGTCAGTAAAATCAGAAAGTGCTGTCACTGCAAAGAAGGGCCGTGAAGTGAGTGACTTAGCACAACAAAATGCTCCAAACCAACCTCTACAAAACACTGAAAGTAGAGTGCAGCATCATGGAGATTACTCAAGTGATGATGATTCAGTTGTTGAAGAAGATCTTCTTGTCAGGATTGATTCTCCAAGCACCCTATCTTTTCCCCATTCTTGA 3516 0.4252 MAAVTASVIAYKLLEEPQPFSLADVAAAAVAADVSSPSPSSSSSGNFAETGNPSDAVVFFGISMVLGIACRHLLRGTRVPYTVALLIIGIALGSIEYGTHHRLGKIGDGIRIWAEINPELLLAVFLPALLFESSFSMEVHQIKRCIAQMILLAGPGVVISTFCLGAVLKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKELGASKKLSTIIEGESLMNDGTAIVVYTLFYRMVLGSTYNWVDVIKFLVQVSFGAVGIGVAFGIASVLWLGFIFNDTVIEISLTLAVSYIAYFTAQEGADLSGVLTVMSLGMFYSAFARTAFKGESQQSLHIFWEMVAYIANTLIFILSGVVIAEGVLGDDNVFHHGTSWTHLLLLYVYVQVSRCIVVGALFPLLRYFGYGLDWKEASILIWSGLRGAVALSLSLSVKRSSGRSLELTPETGTLFVFFTGGIVFLTLIVNGSTTQFVLHYLDMDKLTAAKKRILDFTKYEMLNKALEAFGELGDDEELGPADWATVKRYISCLNNIEGERVHPHGTSESDTNLDAMNLKDIRVRLLNGVQAAYWEMLDEGRISQTTANILMLSVEEAIDLASHEPLCDWKGLKTNVHFPNYYKFLQSSMLPPKLVTYFTVERLESACNICAAFLRAHRVARQQLHDFIGESDVASAVINESIAEGEEARKFLEDVRVTYPQVLGVVKTRQATYVVLNHLIEYVQDLEKAGILEEKEMLHLHDAVQTDLKKLLRNPPLVKLPKITSMHPMLGALPSPVRESLISGTREMMKLRGLTLYKEGSRSNGIWLISNGVVKWESKVIRNKHSFNPTFSHGITLGLYEVLTGRQYICDVLTDSVVFCVFIEADKIVSCLGSDPSVEDFLWQESAIFLSKVLLPQIFEKMSMQELRAMIAERSQMTIYIRGETIEIPNHSVAFLLEGYVKTQARQELVTAPAVLLSSQGNLSFHSLSSSGIRESSFSHQGSSYLVEARARVIIFDIAAFEADSPPARRSNSLLSHSMEHPHRTLRSREHSGLMSWPENFYKQKPHRHNSEGNGRQITNLSARAMQLSIYGSMVELRIPGRSRSSTSNQTKPALSLSYPSIVPQQGRPLLSVKSESAVTAKKGREVSDLAQQNAPNQPLQNTESRVQHHGDYSSDDDSVVEEDLLVRIDSPSTLSFPHS* 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5430 1171 MobiDBLite consensus disorder prediction 1121 1139 - -
Amo13g5430 1171 MobiDBLite consensus disorder prediction 1072 1092 - -
Amo13g5430 1171 Gene3D Jelly Rolls 750 879 IPR014710 -
Amo13g5430 1171 SUPERFAMILY cAMP-binding domain-like 752 874 IPR018490 -
Amo13g5430 1171 MobiDBLite consensus disorder prediction 1113 1153 - -
Amo13g5430 1171 Gene3D - 177 229 - -
Amo13g5430 1171 PANTHER - 50 994 - -
Amo13g5430 1171 Pfam Sodium/hydrogen exchanger family 59 469 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo13g5430 1171 MobiDBLite consensus disorder prediction 1007 1021 - -
Amo13g5430 1171 PANTHER SODIUM/HYDROGEN EXCHANGER 50 994 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo13g5430 1171 MobiDBLite consensus disorder prediction 997 1022 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5430 Amo-Chr13 155203002 155210341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5430 53 1168 Antiporters AT2G01980 64.399 0.0 1392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5430 13 155203002 155210341 Amo13g5430 13 155203002 155210341 ECH