Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5367 ATGAGATTATCGAAGATGGGAGCGATGGCAGATGATTCCAGAAGAGGTGGGAACTGGGAACTGGGAACTGAGATCCAATTAGCTGCGAGGGCTGATAGAGGGAGCAGCGAGAAGAGGGCGATGCCGGTGGCAAAGCGAGAAACGAGTGATGGCAGAGTCATCGCTCACGTCGACATGGATTGCTTCTACGTTCAAGTGGAGCAGAGGAAGCAGCCAAATTTACGGGGCTTACCCACTGCAGTCATACAATACAACTCATTCAAAGGTGGCGCTTTGATTGCTGTTAGCTACGAGGCTCGCAACTTTGGTGTCAAACGTTCAATGCGTGGTGATGAAGCAAAGGACGTGTGCCCGCAAATTCACCTGGTCCAAGTCCCTGTGGCGCATGGTAAAGCCGATCTCAATAGCTACAGGAACGCAGGATCTGAGGTTGTTTCTATTCTTTCAAAGAAGGGTCGTTGTGAGAGGGCTTCGATTGATGAGGTATATCTTGATCTCACTGATGCTGCTGAAACAATGTTATTGGAAATGCCTCCAGAAGCTAGAGAGGATATTGAAGAGGAAGTTCTGAAGTCACATGTTTTGGGACTTGAAATTAAGGAGGGAATTGATGCCAAAGAAGAAGTCAGGAAATGGATTCGTAGGGGTGATGCTACTTATCAAGACAAACTTTTAGCTTGTGGGGCCTTTATTGTTGCCAACCTTAGGATGCAAGTGTTGAAAGATACAGAATTCACCTGTTCTGCTGGTATTGCTCATAATAAGATGCTAGCGAAACTAGCCAGTGGAATGAACAAACCTGCACAACAAACTGTTGTGCCACAGTCATCGGTTGGAGGGTTGCTCGAGTCATTGCCAATAAAGAAAATGAAACAGCTGGGGGGAAAGCTGGGCAGTTCCTTACAAAGTGATCTCGGTTGCAAAACTGTTGGTGATTTGCTTCAGTTTTCAGAGGAGAAGCTACAGCAGTGTTATGGGATCAATACTGGTAACTGGTTGTGGAATATTGCAAGAGGAATAAATGGCGAAGAAGTTGAGGGGCGACTACTTCCCAAGAGCCATGGTTCTGGCAAAACATTTCCTGGGCCTCAAGCTTTGAAGACACTTGCCTCTGTTCAGCACTGGCTTAATGAATTGTGCGAAGAGCTAAGTGAACGTCTTCAGTCTGACTTGAACCTAAACAAACGGATTGCGCACACACTAACACTGCATGCTAGAGCATATAAGAAAGGAGAATCAGATTCACTTAGAAAGTTCCCTTCTGAATCTTGTCCTTTAAGATATGGAACTACAAAGATTCAAGAAGATGCCCTCACTCTGTTTCAAGCTGCATTACGTGAATTTTTGGGCTTTTGCATCTCTAAGACTCATGGGAATGAAAATAACAACTGGGGAGTTACATCACTGTCTGTTTCTGCTAGTAAGATTGTCCCCATACCATCTGGGACACATTCCATTGTAAAATATTTTGGTGGGCAAGTTCCATCTAGCTCATCATTTAATCAACCACTAGGCAATGCATTTGATGAAGCTGTACCATCATCTCCATCAGGTAGTGAAAATTGTTCAGGATTAATTTCCTATGAATTACAGCAAAATTATCCTGGTGGAGATACGGAAATTAAGAATTCAGAGGCTTGTTTGCATGAACAGGATCCATTGTGTAATTTATCCAGGAAAGTAGATAGCTTGCCCAAAGAATCCTCCCTTGAGTCACCTGCAGGAAGTGAAGACAGAACAACAAAGAGTGAACCATATAGAGAGTTACCTGCAAAAGATCCTAGGCCTCTTTCTAGTACACCCAGTTTGAAAGCAGTTGAGAAGAAAAAAACTATGGGAAATAACCTTAAGGGGAATTGTTCAATTATGGATTTCTTCAATAATTACCAAAATTCCCAGTCTTCGTTGGAGCATAAGAATGTGACAAATGCCCATGATGTTAAAACAGCATCATCATTTGGACTTCCGTCTACCATGGATAGCTATTCAACATGCAATCAAATTGAGCAGCCAGCTGAGAGATGCCGTGAAGAGATCGATAGTAACGTTGGGGAATGTAGTGTGCCTAATATGTCACAACGGCGACAAGCTTGGGACTATAACATTGATGAGATTGACCACTCTGTCATTGAAGAATTACCACCAGAAATCCAGCAAGAGTTTCAAGCCTGGCTTCGACCTCACAAGCGGCCTAATCTTTGGGCTATGAATACCATGGGGAATGCAAGCAAATCACCATTTCAAGGTTTTCTTGAGGTTCTTCCACCTGTTGAATTTGCCTGCGTCTATGGATCATCTCTTCATCCCAACAACCACGATAAGAATCTGAGATTGAACAAGAATCATTATGCATCATGGATGGTGCACCTTGGTGGAGGGAAGCTGATGTACAAGTATGGAGTTGTTCGAATGTTTGACCTAATTAATGATGTACTGCAATGGGATAAATTCTACTTGTGTGGCCGTTTACAGAAACCAGTTCATATTGTTGTTGATAATTTGGATATCAACAGCTGCAATGCTGTTAACTTGAGAGCTGCATTATCAACTGCTCTTCTCCTTCTTCCATCAGAGTTCTCTGAGGCAGATCTATATGCCAAAGTGTGTAGCCTTTCATATATGGGTGACCTACGAATGTTATTTGCAGAGGATAAAAACAAGGTGAAGAAGATTGTAGCTGGTCAATTTGATCTATTCCACTCTATGTATCAGCCATTTCTTGAAGAATGTGAAGCTAAGAAGTTATTGAGACTTTCATCCACTGCCAATCACCAAATAGTTGTCTCTCAGGACCATGACTTATCAGTTGTTCACTCTTTAGTTTCTGCACTTCCTCGACCAATCAGAAGTAGTATTAATATGAAGCAAGAGAAGAAATTGAGTGGAACAGGAAAAATCGTAAATGACATTGCTATCAGCTCAAGAGAACAGGCTGCGAATTGCCTGGAGAGAATTCTTAGGCGAAAAGTTATGGTTTCAAGTGCAAGACAGGCAATTTCCGGCTTGCTGGCTGTTGGAGGGGTAAATGCTACCAAGTACCTTGCTAAGAAAGTTAATAAAGCATGGAAGTCATGGAGATGA 3081 0.4268 MRLSKMGAMADDSRRGGNWELGTEIQLAARADRGSSEKRAMPVAKRETSDGRVIAHVDMDCFYVQVEQRKQPNLRGLPTAVIQYNSFKGGALIAVSYEARNFGVKRSMRGDEAKDVCPQIHLVQVPVAHGKADLNSYRNAGSEVVSILSKKGRCERASIDEVYLDLTDAAETMLLEMPPEAREDIEEEVLKSHVLGLEIKEGIDAKEEVRKWIRRGDATYQDKLLACGAFIVANLRMQVLKDTEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPQSSVGGLLESLPIKKMKQLGGKLGSSLQSDLGCKTVGDLLQFSEEKLQQCYGINTGNWLWNIARGINGEEVEGRLLPKSHGSGKTFPGPQALKTLASVQHWLNELCEELSERLQSDLNLNKRIAHTLTLHARAYKKGESDSLRKFPSESCPLRYGTTKIQEDALTLFQAALREFLGFCISKTHGNENNNWGVTSLSVSASKIVPIPSGTHSIVKYFGGQVPSSSSFNQPLGNAFDEAVPSSPSGSENCSGLISYELQQNYPGGDTEIKNSEACLHEQDPLCNLSRKVDSLPKESSLESPAGSEDRTTKSEPYRELPAKDPRPLSSTPSLKAVEKKKTMGNNLKGNCSIMDFFNNYQNSQSSLEHKNVTNAHDVKTASSFGLPSTMDSYSTCNQIEQPAERCREEIDSNVGECSVPNMSQRRQAWDYNIDEIDHSVIEELPPEIQQEFQAWLRPHKRPNLWAMNTMGNASKSPFQGFLEVLPPVEFACVYGSSLHPNNHDKNLRLNKNHYASWMVHLGGGKLMYKYGVVRMFDLINDVLQWDKFYLCGRLQKPVHIVVDNLDINSCNAVNLRAALSTALLLLPSEFSEADLYAKVCSLSYMGDLRMLFAEDKNKVKKIVAGQFDLFHSMYQPFLEECEAKKLLRLSSTANHQIVVSQDHDLSVVHSLVSALPRPIRSSINMKQEKKLSGTGKIVNDIAISSREQAANCLERILRRKVMVSSARQAISGLLAVGGVNATKYLAKKVNKAWKSWR* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5367 1026 Gene3D - 345 477 IPR036775 GO:0003684|GO:0006281
Amo13g5367 1026 Pfam Phosphatidate cytidylyltransferase, mitochondrial 794 1020 IPR015222 GO:0004605|GO:0032049
Amo13g5367 1026 Pfam impB/mucB/samB family 57 262 IPR001126 GO:0006281
Amo13g5367 1026 ProSiteProfiles UmuC domain profile. 54 294 IPR001126 GO:0006281
Amo13g5367 1026 SUPERFAMILY DNA/RNA polymerases 47 345 IPR043502 -
Amo13g5367 1026 Gene3D - 287 343 - -
Amo13g5367 1026 MobiDBLite consensus disorder prediction 577 591 - -
Amo13g5367 1026 PANTHER DNA POLYMERASE ETA 46 733 - -
Amo13g5367 1026 MobiDBLite consensus disorder prediction 501 520 - -
Amo13g5367 1026 Gene3D - 61 128 - -
Amo13g5367 1026 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 350 478 IPR036775 GO:0003684|GO:0006281
Amo13g5367 1026 MobiDBLite consensus disorder prediction 559 603 - -
Amo13g5367 1026 Pfam impB/mucB/samB family C-terminal domain 351 479 IPR017961 GO:0003684|GO:0006281
Amo13g5367 1026 Gene3D - 129 273 IPR043128 -
Amo13g5367 1026 PANTHER DNA POLYMERASE ETA 46 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5367 Amo-Chr13 153903757 153913257 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5367 13 153903757 153913257 Amo13g5367 13 153903757 153913257 ECH