Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5348 ATGGTGAGGGATGATGAGAAGAGAATGATGATGATGATGGAGCAAGAGCAAGAAGAGGAAGCTGTGCCTGCATGGCTATCGAAGCTTATGGGAGAGAGATTCTTCGGTGAGTGTGGGGCCCACCAGAACCTCCGAAAGAACGACAAGAACGTCCTTTGCCTCCGCTGCTGCCTCTCCCTCTGCCCTCACTGCCTCCCTCTCCACCCACACCACCACCCTCTCCTCCAGGTGAGAAGGTATGTCTACCATGACGTGGTTCGATTGGGTGATCTTGAAAAGCTCATTGATTGCTCCAATATTCAGCCATACACGATTAATGGGGCGAAAGTGATATTCTTGAATGAGAGGGCACAGTCAAGGTCATCATGCAGAGGTGGCACTGGCAACTCTTGCTGCTCTTGTGACAGGATTCTTCAGGACCCCTTCCACTTCTGTTCTCTCTCATGCAAGGTTGATCACATGGTGTATGAGGGTGAAAGGTTGTCGAGCATTTTGCATCGATTCGATGAATCAGATTTCTCGTTTTCGCAGTTCGAGGGTCTGAGAGTGGATAGTAGTTCGGAGCTAGTTGATGAAGATAATACCCAATTTGCCCCCAATGGCTCTTGCTCCAACACAGATGCCACAGCCAGTAATTCCGTAATTTCAAGTGAAGCCAATAGGAACAAGAACAAGACCAAGACCAAGTCCAAGTCCAATGGCTTCTTCCATTCTCTCGGTAGCAGGCGAAAAGGTGCTCCTCATAGGGCTCCTTTCTGCTAG 762 0.4934 MVRDDEKRMMMMMEQEQEEEAVPAWLSKLMGERFFGECGAHQNLRKNDKNVLCLRCCLSLCPHCLPLHPHHHPLLQVRRYVYHDVVRLGDLEKLIDCSNIQPYTINGAKVIFLNERAQSRSSCRGGTGNSCCSCDRILQDPFHFCSLSCKVDHMVYEGERLSSILHRFDESDFSFSQFEGLRVDSSSELVDEDNTQFAPNGSCSNTDATASNSVISSEANRNKNKTKTKSKSNGFFHSLGSRRKGAPHRAPFC* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5348 253 Pfam PLATZ transcription factor 78 151 IPR006734 -
Amo13g5348 253 MobiDBLite consensus disorder prediction 214 253 - -
Amo13g5348 253 PANTHER - 23 252 - -
Amo13g5348 253 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 23 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5348 Amo-Chr13 153689683 153693124 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Amo13g5348 PLATZ 1.5e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5348 13 153689683 153693124 Amo13g5348 13 153689683 153693124 ECH