Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4921 ATGGCGCCAAATGCCCTCTCCTATGCTCCCGCCTTTCGCATTCTCACCATAATCCTCCTCCTGATCCGCCCAAGCGCGGCCACCGCCCATGACTACCACGACGCTCTCCGCAAGAGCATCCTCTTCTTCGAAGGCCAGCGCTCCGGCAGACTCCCACCCGACCAGCGCCTCCGATGGCGCCACGACTCCGCATTACACGACGGCGCCACCGCCGGATTGGACTTGACTGGAGGGTACTACGACGCCGGGGACAACATCAAGTTCGGGTTTCCGATGGCGTTCACTACAACAATGCTGGCGTGGAGCGTGATAGACTTCGGGAGGAGCATGGGGCCTGAGCTCGGGAACGCATTGAAGGCGGTGAGGTGGGGAACGGACTACCTGCTGAAGGCAACGTCGAAGGTAGGGACCGGTGTGGTGTTCGTGCAGGTGGGAGACCCTCTCTCGGACCATAACTGTTGGGAGAGGCCAGAGGACATGGACACTCTCCGTACCGTTTACAAGGTGGATGGGTCCCACCCTGGCTCTGACGTGGCAGGAGAAACGGCCGCTGCACTTGCCGCTGCCTCCATCGTCTTTAGATCACGTGATCCCGCTTACTCTAGACTTCTCCTCAATCGAGCCGTTACGGTGTTCGGGTTCGCTGACAGGCATCGTGGTGCATACAGTAACAGCCTAAAGAAAGCAGTCTGCCCATTTTACTGTGACGTCAATGGGTACCAGGACGAGCTGTTGTGGGCAGCAGCGTGGTTGCACAAGGCGTCGCGTAGGCGTCAGTACAGGGAATACATTGTAAGGAACGAGGTGGTATTGAGAGCTGGGGACACCATTAATGAGTTTGGTTGGGATAACAAGCATGCCGGGATTAATGTTCTCATTTCCAAGGAGGTGTTGATGGGAAGAGCAAACTATTTTGCGTCGTTCAAGCAAAATGCAGATGGATTTATTTGTTCGATATTGCCCGGAATTTCCCACCCTCAAGTTCAGTATTCCCCAGGTGGTCTTATTTTCAAGGCTGGAGGAAGCAACATGCAGCATGTAACGTCCCTCTCTTTTCTGCTCCTAGCCTATTCTAACTACCTAAGCCACGCCAATAAGGTTGTGCCATGTGGCGAGACCACTGCCACGCCAGCTTTGCTCAAACACCTTGCTAAACGCCAGGTGGACTACATTCTTGGGGATAACCCAATGGGAATGTCGTACATGGTTGGATACGGTGCTCGCTACCCACAGAGGATACATCACCGGGCCAGCTCGCTCCCATCGGTGGCGGTCCACCCAGCCCACATTGGATGCAAAGCTGGATCTCGATATTTCCTTAGCCCAAATCCCAACCCGAATGTGTTGGTCGGAGCCGTGGTTGGTGGGCCTAACAACAACACAGATGCTTTCCCGGATTCCAGGCCTTTCTATCAGGAGACTGAGCCCACTACATATATCAATGCCCCTCTAGTGGGCCTGCTCGCTTTCTTTTCAGCCCACTCTTGA 1488 0.5497 MAPNALSYAPAFRILTIILLLIRPSAATAHDYHDALRKSILFFEGQRSGRLPPDQRLRWRHDSALHDGATAGLDLTGGYYDAGDNIKFGFPMAFTTTMLAWSVIDFGRSMGPELGNALKAVRWGTDYLLKATSKVGTGVVFVQVGDPLSDHNCWERPEDMDTLRTVYKVDGSHPGSDVAGETAAALAAASIVFRSRDPAYSRLLLNRAVTVFGFADRHRGAYSNSLKKAVCPFYCDVNGYQDELLWAAAWLHKASRRRQYREYIVRNEVVLRAGDTINEFGWDNKHAGINVLISKEVLMGRANYFASFKQNADGFICSILPGISHPQVQYSPGGLIFKAGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGETTATPALLKHLAKRQVDYILGDNPMGMSYMVGYGARYPQRIHHRASSLPSVAVHPAHIGCKAGSRYFLSPNPNPNVLVGAVVGGPNNNTDAFPDSRPFYQETEPTTYINAPLVGLLAFFSAHS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4921 495 PANTHER ENDO-1,4-BETA-GLUCANASE 10 495 - -
Amo13g4921 495 SUPERFAMILY Six-hairpin glycosidases 30 493 IPR008928 GO:0005975
Amo13g4921 495 Pfam Glycosyl hydrolase family 9 32 488 IPR001701 GO:0004553|GO:0005975
Amo13g4921 495 Gene3D - 27 495 IPR012341 GO:0005975
Amo13g4921 495 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 464 482 IPR033126 -
Amo13g4921 495 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 390 416 IPR018221 -
Amo13g4921 495 PANTHER ENDOGLUCANASE 10 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4921 Amo-Chr13 148205606 148210576 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4921 13 148205606 148210576 Amo13g4921 13 148205606 148210576 ECH