Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4894 ATGGCAGCTCTACCCTTCTCAACAATCTGCAGGCATTCCAATTCATCTTTACACTCCAATTCCAAATCAAGCTTCACTGGTTTCAGTCAAAGAAACAATATTGGCCACTTGTTTCTCATCAGGAAGTGCAGTTCCAGAAGGGTAGTAAGAAAGTTATGTGTGAAGAATGTTGCCAGTGATAAAAAGCAGGAACAGAATGAACCACTCACTGAACAAGAAACTTTAGATAAATTTGTGCCAGATTCTGCATCTATTGCTGCAAGCATTAAGTATCATGCCGAGTTCACCCCGTCTTTCTCTCCGGAGAAGTTTCAGCTAAGTAAAGCATTCTATGCGACTGCAGAGAGTGTCCGTGATTCCCTCATCATAAACTGGAATGCAACGTATGAATATTATGAGAGGATGAATGTTAAGCAAGCTTACTATATGTCCATGGAGTATCTACAGGGTAGGGCATTGCTAAATGCAATTGGAAATTTACAACTTTCAGGCCCTTATTCTGAGGCTCTAAGAAAGCTGGGACACAATTTAGAGAATGTGGCTAATCAGGAGCCAGATGCTGCCCTTGGGAACGGAGGATTAGGCCGCCTTGCTTCTTGCTTTTTGGACTCCTTGGCAACATTGAATTACCCTGCATGGGGTTATGGGCTAAGATACAAGTATGGTTTGTTCAAACAACTTATAACAAAGGATGGTCAAGAGGAAGTTGCTGAAAGCTGGCTCGAGATGGGAAATCCCTGGGAAATTCCTAGAAACGATGTTTCTTATCCGGTTAAATTCTATGGAGAAATTACTTCAGGGCCAGATGGAAGAAAAGAATGGATTGGAGGAGAAAATATCATGGCAGTTGCTTATGATGTTCCAATACCAGGATACAAAACTAGAACCACTATAAACTTGAGGTTGTGGTCCACTAAAGTTTCACCTGAAGAGTTCGATTTGCGAGCTTACAATGCTGGGGATCATGACAAAGCATATACTGCTCTGAAGAATGCAGAGAAGATCTGCTATGTATTATACCCTGGGGACGAATCGATTGAAGGGAAGACTCTACGATTGAAGCAACAGTATACCTTATGCTCGGCCTCTCTCCAGGATATTATTGCTCGTTTCGAAAAGAGATCAGGAAAGGCCATTGATTGGGATACTTTCCCGGATAAAGTGGTGGTCCAAATGAATGATACTCACCCAACACTCTGCATTCCAGAGTTGATTAGAATATTGATGGATGTAAAAGGTTTAAGCTGGGATAAAGCCTGGGAGATAACTAAAAGAACCGTTGCTTACACAAATCACACAGTTCTACCTGAGGCACTAGAGAAATGGAGTTTGAAACTTCTGCAGGATTTGCTTCCTCGACACGTGGAGATAATAAGAAAAACTGATGAAGTGTTCATACATGAAATTATATCTGAGTATGGGATGAATGACCTTGACTTGTTGGATCAAAAGCTCAGAAAGATGAGAATACTGGAGAACATTGAGTTGCCTAACTCAGTGGTTGAGCTGATTAATAGCTCAATAGAGATTCCTGATACTGATCCTATAGAGGAAAGAGATGTTATTGATACTGATATAAAGGCAACAGAAGAGAAGGAAGAAGAAGCAGAAGCCAAAGAAGTGGAAGAAGACGAAGACGAAGTAGGGAAAGAAGAACCGGAAGAAGATGATGGCGAAGAAGAGCCATCTGTGGAAGAGGATACCGAAAAGAAAACAACATGGACATTCAAAGTTGATTCAAAACAGCCAAAAATGGTTCGCATGGCTAATCTATGCGTTGTAGGTGGTTTTTCTGTGAATGGAGTAGCTGAGATTCACAGTGAGATTGTAAAACAGGAAGTTTTCAATGATTTCTACGAGATGTGGCCTGAAAAGTTCCAGAATAAAACAAATGGGGTGACCCCAAGAAGATGGATCCGCTTTTGCAATCCTGATCTTAGTAAAATCATAACCAAGTGGATTGGAACAGAGGACTGGGTCACAGATATTGAGAAATTGGCTATACTTCGCAAGTTTGCAGATAATGAGGATTTACAATCAGAGTGGATGGAATCAAAGAGAAGGAACAAGATTAAGGTTGCATCATTTATCAAGGAAAGAACTGGTTATGATGTTAGTTCAAATGCAATGTTTGATGTACAGGTGAAGCGCATTCATGAATACAAACGGCAGTTACTGAATATCTTGGGAATCGTTTATCGCTACAAAAAGATGAAAGAAATGAGTGATGAGGAAAGGAAACAAAGTTTTGTTCCACGAGTTTGTATTTTCGGAGGGAAAGCATTTGCAACATATGTTCAAGCCAAGAGAATTGTAAAATTCATCACAGATGTAGGAGCCATAATCAATCATGATCCAGAGATTGGAGATCTATTAAAGGTTGTATTTGTTCCTGATTACAATGTCAGTGTGGCCGAAATGCTAATTCCTGGCAGCGAGTTGTCGCAGCACATCAGCACGGCTGGTATGGAGGCCAGTGGAACAAGCAACATGAAGTTTGCAATGAATGGATGCTTACTTATTGGAACTCTTGATGGGGCTAATGTTGAAATAAGGGAAGAAGTTGGAGAAGATAACTTCTTCCTCTTTGGCGCGCGTGCTCACGAAATCTCTACGCTGCGAAAAGAAAGAGCAGAGGGAAAGTTTGTAGCAGATCCACGTTTTGAAGAAGTAAAGGCATATGTAAGGAGTGGTGTTTTTGGAAGCTACAACTATGAAGAATTGATTGGATCCTTGGAAGGGAATGAAGGGTATGGTCGTGCTGATTACTTCCTTGTTGGAAAGGACTTCCCTAGCTACTTGGACTGCCAAGACGCCGTCGACAAAGCATATCGAGATCAAAAGAGGTGGACAAGAATGTCAATCTTGAACACAGCCGGTTCATACAAATTCAGCAGTGACCGGACTATTCATCAATATGCCAGAGACATTTGGAGAATTCAACCACTTTTCCTGCCTTGA 2961 0.4117 MAALPFSTICRHSNSSLHSNSKSSFTGFSQRNNIGHLFLIRKCSSRRVVRKLCVKNVASDKKQEQNEPLTEQETLDKFVPDSASIAASIKYHAEFTPSFSPEKFQLSKAFYATAESVRDSLIINWNATYEYYERMNVKQAYYMSMEYLQGRALLNAIGNLQLSGPYSEALRKLGHNLENVANQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKDGQEEVAESWLEMGNPWEIPRNDVSYPVKFYGEITSGPDGRKEWIGGENIMAVAYDVPIPGYKTRTTINLRLWSTKVSPEEFDLRAYNAGDHDKAYTALKNAEKICYVLYPGDESIEGKTLRLKQQYTLCSASLQDIIARFEKRSGKAIDWDTFPDKVVVQMNDTHPTLCIPELIRILMDVKGLSWDKAWEITKRTVAYTNHTVLPEALEKWSLKLLQDLLPRHVEIIRKTDEVFIHEIISEYGMNDLDLLDQKLRKMRILENIELPNSVVELINSSIEIPDTDPIEERDVIDTDIKATEEKEEEAEAKEVEEDEDEVGKEEPEEDDGEEEPSVEEDTEKKTTWTFKVDSKQPKMVRMANLCVVGGFSVNGVAEIHSEIVKQEVFNDFYEMWPEKFQNKTNGVTPRRWIRFCNPDLSKIITKWIGTEDWVTDIEKLAILRKFADNEDLQSEWMESKRRNKIKVASFIKERTGYDVSSNAMFDVQVKRIHEYKRQLLNILGIVYRYKKMKEMSDEERKQSFVPRVCIFGGKAFATYVQAKRIVKFITDVGAIINHDPEIGDLLKVVFVPDYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFAMNGCLLIGTLDGANVEIREEVGEDNFFLFGARAHEISTLRKERAEGKFVADPRFEEVKAYVRSGVFGSYNYEELIGSLEGNEGYGRADYFLVGKDFPSYLDCQDAVDKAYRDQKRWTRMSILNTAGSYKFSSDRTIHQYARDIWRIQPLFLP* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4894 986 Coils Coil 519 551 - -
Amo13g4894 986 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 824 836 IPR035090 -
Amo13g4894 986 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 571 980 IPR011833 GO:0004645|GO:0005975|GO:0030170
Amo13g4894 986 PIRSF Glucan_phosphorylase_GlgP 77 490 IPR000811 GO:0005975|GO:0008184
Amo13g4894 986 PIRSF Glucan_phosphorylase_GlgP 534 985 IPR000811 GO:0005975|GO:0008184
Amo13g4894 986 MobiDBLite consensus disorder prediction 535 564 - -
Amo13g4894 986 Gene3D Glycogen Phosphorylase B; 525 635 - -
Amo13g4894 986 PANTHER GLYCOGEN PHOSPHORYLASE 29 986 IPR000811 GO:0005975|GO:0008184
Amo13g4894 986 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 578 983 - -
Amo13g4894 986 CDD GT35_Glycogen_Phosphorylase 88 980 - -
Amo13g4894 986 Pfam Carbohydrate phosphorylase 570 980 IPR000811 GO:0005975|GO:0008184
Amo13g4894 986 Pfam Carbohydrate phosphorylase 170 493 IPR000811 GO:0005975|GO:0008184
Amo13g4894 986 Gene3D Glycogen Phosphorylase B; 80 511 - -
Amo13g4894 986 Gene3D Glycogen Phosphorylase B; 636 965 - -
Amo13g4894 986 MobiDBLite consensus disorder prediction 530 575 - -
Amo13g4894 986 PANTHER ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC 29 986 - -
Amo13g4894 986 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 70 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4894 Amo-Chr13 147874789 147880576 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4894 13 147874789 147880576 Amo13g4894 13 147874789 147880576 ECH