Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4889 ATGTATAGGCCTGTGCCGGTGGCTGCTTCAGCCACGCCCCGAGGTGGATTGCCTACTGACAGTGGTGACTCTGTGGTGACCTTGGATCAAGTTCCGCGATGGAATGATGCTGATCAGTCCTTGGGGTATGAAAATGGAGAATATTCTGCTACATACTTTCCTGATCCTCTGGCATCGCCTTCTGGTGTAGATGGTAGTAGCATCGGTTCTGTTTCAAGATTTCCTGTTGATCATGAAATTAACTCAAAGATATATTTGTGGAGGGGAAATCCATGGAATCTTGAGGTGGATGCTGTTGTTAATTCAACAAATGAGAATATGGATGAAACACACAGCAGCCCTGGATTGCATGCTGCAGCTGGACCTGGCCTTGCAGAAGAATGTGCGACTCTGGGTGGATGCCGAACGGGGATGGCTAAAGTTACCAATGCATATGACCTTCCCGCCAGGAGAATTATCCACACTGTTGGTCCAAAGTATGCTGTGAAGTACCATACTGCTGCTGAGAATGCTTTAAGTCATTGTTATCGTTCTTGCCTGGAGCTTTTAGTTGATAATGGACTCCACAGTATTGCTATGGGTTGTATTTATACAGAGGCAAAAAACTATCCCAGAGAACCAGCTGCGCATGTAGCTATAAGAACTGTTCGGCGGTTTCTTGAGAAGCAGAAAGACAACATAAAAGCTGTTGTCTTTTGCACTACCAGCACAACCGATACAGAGATATATAAACGGTTGCTTCCACTTTACTTTCCACGAGATAAAAACGAGGAGCAGTTTGCATTTTCAAAACTTCCTGCAGATGTTGGAGATGAAAATGGTGAGACCATCATAGATGAGCGTAAAATCAGAATTAAACCTTTGCCTAAAAAGAATGTTTCAAAACCAACTGAAGATCCAGTTGATCTTCCTGTCAGTGATGCTGGCTTGGTTCGCAGGAATTCATCATATTTAGATTCATTTCTGGATCCTGCGTTCATGTCCTTGATTAAAGACCCTGACCAAAGGCGTTTGGAGCAGTGGGAGAAAACTGCTGAAGCACAAAGAGGCTGGAATTGTACCAAATTGCTTGGATATGGTGACGTTGGTGGACCTCCACTGTCTGCTGCTGAAGAATATTCTCTCCACTCTAGATACCTTTCTAAAGCAAATTCTTTAAATCTTTCTGAAATTGCAGAGATGAAAATTGTTTATCGTGGAGGGGTAGACAGTGAGGGTAGACCCGTCATGGTGGTTGTGGGAGCTCACTTTTTGCTCAGATGTCTTGATCTTGAACGATTTGTGCTTCATGTGGTGAAGGAGTTTGAGCCCATAATACAGAAACCTTATACTATTGTCTACTTCCACTCTGCTGCTTCTTTGCAGATGCAGCCTGATCTAGGTTGGATGAGAAGATTGCAACAAATACTTGGTAGGAAGCACCAGCGCAACCTGCATGCAATATATGTCCTTCATCCAACTTTTGGGCTTAAGGCGGCAGTATTTGCGCTACAGATGTTTGTGGATAATGTGGTATATTACAGGAACCTCAACCTATATGATGACCTCATATTGTACATGTTATTATCATTAACCATTTATTTTCAGGTTTGGAAGAAAGTAGTATATGTTGATCGACTTCTGCAGCTCTTCAGATATGTACCTCGCGAACAGTTGACCATACCAGATTTTGTGTTCCAGCATGACTTAGAAGTTAATGGAGGGAAAGGTGTTATTGTGGATCCAAGAACAAAATATGTTTACCAAAGACCAACATGA 1758 0.4283 MYRPVPVAASATPRGGLPTDSGDSVVTLDQVPRWNDADQSLGYENGEYSATYFPDPLASPSGVDGSSIGSVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENMDETHSSPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRIIHTVGPKYAVKYHTAAENALSHCYRSCLELLVDNGLHSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDNIKAVVFCTTSTTDTEIYKRLLPLYFPRDKNEEQFAFSKLPADVGDENGETIIDERKIRIKPLPKKNVSKPTEDPVDLPVSDAGLVRRNSSYLDSFLDPAFMSLIKDPDQRRLEQWEKTAEAQRGWNCTKLLGYGDVGGPPLSAAEEYSLHSRYLSKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLHVVKEFEPIIQKPYTIVYFHSAASLQMQPDLGWMRRLQQILGRKHQRNLHAIYVLHPTFGLKAAVFALQMFVDNVVYYRNLNLYDDLILYMLLSLTIYFQVWKKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGVIVDPRTKYVYQRPT* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4889 585 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 1 510 - -
Amo13g4889 585 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 522 564 - -
Amo13g4889 585 Gene3D Leucine Aminopeptidase, subunit E, domain 1 18 256 IPR043472 -
Amo13g4889 585 ProSiteProfiles Macro domain profile. 71 251 IPR002589 -
Amo13g4889 585 MobiDBLite consensus disorder prediction 1 25 - -
Amo13g4889 585 Pfam Macro domain 100 212 IPR002589 -
Amo13g4889 585 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 510 - -
Amo13g4889 585 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 522 564 - -
Amo13g4889 585 CDD Macro_GDAP2-like 82 250 IPR035793 -
Amo13g4889 585 Pfam Divergent CRAL/TRIO domain 406 562 IPR001251 -
Amo13g4889 585 Gene3D - 389 565 IPR036865 -
Amo13g4889 585 CDD SEC14 394 555 IPR001251 -
Amo13g4889 585 SMART YBR022w_8 83 212 IPR002589 -
Amo13g4889 585 SUPERFAMILY Macro domain-like 70 280 IPR043472 -
Amo13g4889 585 SUPERFAMILY CRAL/TRIO domain 388 508 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4889 Amo-Chr13 147852880 147859121 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4889 13 147852880 147859121 Amo13g4889 13 147852880 147859121 ECH