Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4516 ATGGTTCTGTCGAAGACGGCATCTGAGAGCGACGTCTCGGTTCACTCAACGTTTGCGTCACGCTATGTGAGGACCTCACTTCCCAGGTTCAAGATGCCGGAGGAGTCGATCCCCAAGGAGGCAGCGTACCAGATAATAAACGACGAGCTGATGTTAGACGGAAATCCCAGGCTGAACCTGGCGTCGTTTGTGACGACTTGGATGGAGCCGGAGTGCGACAAACTCATAATGGCCGCCATTAACAAGAACTACGTTGACATGGATGAGTACCCTGTCACCACTGAGCTCCAGAATCGGTGTGTAAACATGATAGCTCATCTATTCAATGCGCCACTTGGAGATTCAGAAACTGCCGTTGGTGTTGGGACGGTTGGATCATCGGAGGCCATAATGCTGGCTGGATTGGCATTCAAAAGAAAATGGCAGAACAAAAGGAAAGAAGAAGGTAAGCCTTATGACAAGCCCAACATTGTGACCGGTGCCAATGTCCAGGTTTGCTGGGAGAAATTCGCAAGGTACTTTGAGGTGGAGTTGAAGGAGGTGAAGCTCCGTGATGGATACTATGTTATGGACCCTGAAAAGGCTGTGGACTTGGTTGATGAGAACACCATTTGCGTTGCTGCTATTCTTGGTTCCACCCTCAACGGTGAGTTTGAAGATGTCAAGCGCTTAAATGATCTTCTCATTCAAAAGAATAATCAAACCGGCTGGGATACTCCTATTCATGTTGATGCTGCCAGTGGTGGATTCATTGCTCCGTTTCTATATCCCGAGCTTGAGTGGGACTTCCGGTTACCGCTGGTCAAGAGTATCAATGTCAGCGGCCACAAGTACGGTCTAGTTTACGCCGGAATTGGCTGGGTTATCTGGAGAAGCAAGGATGACCTGCCTGAGGAACTCATCTTCCACATCAACTATCTCGGAGCTGATCAACCCACATTCACTCTTAACTTCTCCAAAGGTTCCAGTCAAGTCATTGCTCAATACTACCAACTAATTCGCCTTGGTTATGAGGGATATAAAAATGTGATGGAAAATTGTAGGGACAACATGTTAGTGCTCAAGGATGGACTTGAGAAAACAGGGCGCTTTGACATTGTTTCCAAGGACGATGGTGTTCCTTTGGTGGCCTTCACACTCAAAGACAGCAGCCGCTTCAATGAATTCCAAGTCTCTGACTTGCTCAGGCGCTTTGGCTGGATAGTGCCGGCATACACCATGCCCCCGGATGCACAGCATGTTACCGTTCTCCGCGTGGTCATCCGGGAGGACTTCTCCAGGACCCTCGCAGAGCGCCTTGTGGCTGATGTGGAGAAGGTGCTTCACGAGCTTGATATGCTTCCCCCCAAGGTAGTTGCGGTTAATGGAGAAGAGGCAGCAACAAGCTCTAATGGCAAGGTTAAGAAGACTGCTCTGGAGACACAGAGGGAGATCACTGCAGTTTGGAAGAAGTTTGTACTGGAAAGGAAGAAGCTGAATGACAAGATGAATGGGGTTTGTTGA 1503 0.489 MVLSKTASESDVSVHSTFASRYVRTSLPRFKMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKEEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVDLVDENTICVAAILGSTLNGEFEDVKRLNDLLIQKNNQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKDDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCRDNMLVLKDGLEKTGRFDIVSKDDGVPLVAFTLKDSSRFNEFQVSDLLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVADVEKVLHELDMLPPKVVAVNGEEAATSSNGKVKKTALETQREITAVWKKFVLERKKLNDKMNGVC* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4516 500 CDD DOPA_deC_like 59 439 - -
Amo13g4516 500 Gene3D - 1 65 - -
Amo13g4516 500 Gene3D - 66 360 IPR015421 GO:0003824
Amo13g4516 500 Gene3D - 361 448 - -
Amo13g4516 500 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Amo13g4516 500 PANTHER GLUTAMATE DECARBOXYLASE 1 500 - -
Amo13g4516 500 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Amo13g4516 500 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Amo13g4516 500 PANTHER GLUTAMATE DECARBOXYLASE 1 500 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4516 Amo-Chr13 141828166 141832962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4516 1 500 Calmodulin-binding Proteins AT5G17330 83.004 0.0 882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4516 13 141828166 141832962 Amo13g4516 13 141828166 141832962 ECH