Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4152 ATGGAGAACATGATGGGTCTGCTGAGAATTCATGTCCAAAGAGGGGTTAATCTCGCTATCAGAGATGTAGTGAGCAGTGATCCTTATATCATCATCAAAATGGGCAAGCAGAAGCTGAAGACTCGGGTAGTGAAGAAGAATCTCAACCCTGAATGGAATGATGATTTGACTCTCTCCATTTCAGATCCCAATCTTCCAGTGCACCTACATGTATATGACAGGGACAGATTGAGCTTTGATGACAAAATGGGGGATGCTGTGTTTGAGATTGGTTCGTTTATTGAAGCGGTGAAGATGCGGCTGCATGGTGTCCCTAATGACACCATAGTTACAAGGGTGCAGCCTAGCAGACAGAACTGCTTGGCAGAAGAGAGCCAAATTGTGGTGAGGGATGGCAAAGTGGTGCAAAATATGGTTCTCAGGCTTAGAAATGTGGAGTGTGGTGAAGTGGAACTTCAACTTCATTGGATTGACATTCCTGGTTCCAAGGGCCTCTAG 498 0.4538 MENMMGLLRIHVQRGVNLAIRDVVSSDPYIIIKMGKQKLKTRVVKKNLNPEWNDDLTLSISDPNLPVHLHVYDRDRLSFDDKMGDAVFEIGSFIEAVKMRLHGVPNDTIVTRVQPSRQNCLAEESQIVVRDGKVVQNMVLRLRNVECGEVELQLHWIDIPGSKGL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4152 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Amo13g4152 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Amo13g4152 165 Gene3D C2 domain 3 161 IPR035892 -
Amo13g4152 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Amo13g4152 165 Pfam C2 domain 6 92 IPR000008 -
Amo13g4152 165 SMART C2_3c 7 102 IPR000008 -
Amo13g4152 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 164 - -
Amo13g4152 165 CDD C2_ArfGAP 6 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4152 Amo-Chr13 134961966 134964827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4152 38 165 C2H2 Transcription Factor Family AT1G70790 56.923 5.15e-49 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4152 13 134961966 134964827 Amo13g4152 13 134961966 134964827 ECH