Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2349 ATGGTGGTGTTGTCCAAACCAACAACAGAGCAGTACTCCTGCATAAGGAAAACACCCACATTCCCTACATCCATCGTCCCTGTGGTGGACCTTTCCAAACCCGTGGAAGCAAAGACTCTCATATTGAAGGCGTGTGAGGACTATGGCTTCTTCAAGGTCATTAACCATGCTGTCCCTATGGAAGCTATCTCCAACCTGGAGTCCCAAGCCGCAGAGTTCTTCTCCCTCCCCCTCACTCAGAAGGAGAAAGCAGGCACTCCCAATCCATTTGGATATGGCAACAAGAACATTGGACGCAACGGTGACCTTGGTTGGGTCGAATACCTCCTTCTCACAAACAACCATGACTACAACTTCATCAGACTCTCTTCTGTTTTTGGTCCAAAAGCAGAGCAGTTTCGGAATGTGCTAAGTGATTACATGTGTGCTGTGAGGAAGATGGCATGTGTGATTCTTGAGCTGATGGCTGAGGGATTGAACATTGAGCAAAAGAATGTGTTCAGCAAGATGATGATGGACAAGGAGAGTGACTCAGTCTTCAGGCTCAACCATTACCCTCCATATCCTGAGAACTTCAATAATAATAATGGCAAAGGCATGATTGGTTTTGGTGAGCATACAGACCCACAAATCATATCGCTGTTGAGGTCCAACAACAGTTCGGGACTCCAAATTTGTTTGAGAGATAGGAGTTGGGTTTCGGTGCCACCTGATCACAACTCTTTCTTTGTCAATGTCGGTGATGCTCTGCAGGTTTTGACCAATGGACGGTTTCGGAGCGTACGGCACAGGGTTCTGGCGAACGGGTTGAAATCAAGGCTGTCAATGATTTACTTTTGTGGTCCACCTCTGAGTGAGAGAATAGCCCCATTGCCTCTCTCTTATTGA 888 0.4696 MVVLSKPTTEQYSCIRKTPTFPTSIVPVVDLSKPVEAKTLILKACEDYGFFKVINHAVPMEAISNLESQAAEFFSLPLTQKEKAGTPNPFGYGNKNIGRNGDLGWVEYLLLTNNHDYNFIRLSSVFGPKAEQFRNVLSDYMCAVRKMACVILELMAEGLNIEQKNVFSKMMMDKESDSVFRLNHYPPYPENFNNNNGKGMIGFGEHTDPQIISLLRSNNSSGLQICLRDRSWVSVPPDHNSFFVNVGDALQVLTNGRFRSVRHRVLANGLKSRLSMIYFCGPPLSERIAPLPLSY* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2349 295 Gene3D - 4 294 IPR027443 -
Amo13g2349 295 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 1 10 292 - -
Amo13g2349 295 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 175 282 IPR005123 -
Amo13g2349 295 Pfam 2OG-Fe(II) oxygenase superfamily 177 282 IPR044861 -
Amo13g2349 295 SUPERFAMILY Clavaminate synthase-like 21 292 - -
Amo13g2349 295 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 109 IPR026992 -
Amo13g2349 295 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 292 - -
Amo13g2349 295 PRINTS Isopenicillin N synthase signature 41 58 - -
Amo13g2349 295 PRINTS Isopenicillin N synthase signature 242 268 - -
Amo13g2349 295 PRINTS Isopenicillin N synthase signature 206 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2349 Amo-Chr13 40557531 40560051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2349 44 286 Glycosyltransferase AT5G59530 28.405 9.18e-23 94.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2349 13 40557531 40560051 Amo13g2349 13 40557531 40560051 ECH