Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2271 ATGCCTTCCGATTCCGTTCAATTCCTTGCATCATGTAAATGTGAACTGCTGCCATTGTTCTCCAAAATGTTTGATCAGTCTCTGAAGTGTTCAAATTCCTTCGGCACAGGTGCAGTGGATTCACAGGAGCAGAGTGTTTGTAAAAAGTTTAAGGGTCAATTGTTCAATTTGATTGACCAATTGGAGTGCACCACACCTCACTTCATTCGATGCATAAGGCCAAATACTAAGCAGCTGCCTGACATTTATGATGAAGACCTTGTCCTACAACAGCTCAAGTGTAGTGGGATTCTTGAGGTTGTTAGAACTTCAAGGGCTGGATATCCAACTCGAATGACTCATCAAGAGTTTTCCACAAGGTATGGGTTTMTGCTTTCTGAGGCCAACAAATATCAGGATCCATTGAGCACTTCAGTTGCCATTTTGCAACAATTTAATATCCCTTCTGAGATGTACCAATTCGGCTATACTAAGTTGTATCTTCGAGCTGGGCAGACTGGTTCACTGGAGCTCAAGAGAAAACAGGTTTTGCAAGGAATAGTTGTGGTTCAAAAATACTTCCGTGGTTATCAAGCAAGGAGTTATTTCCAGGAACTTAAGAAAGGAGTGGCAACATTTCAATCATTTGTTCGTGGAGAAATTACAAGAAGGAAATTTGGTGTTATGAAGCCTTCTATAACAATTTATTCTAAAAATCTTGAGGAGATCCAAGCAATCATACAACTGCAATCTGTAATTCGTGGGTGGCTGGCTCGTAAGGATGCAAGTACTCCAAAYGGTTTTAAGAGTTATCCTGAAAATGCAAAACATAGACGGAAATCACTTGTTAAGATGCTGGAAGTGAAGGATATATCCAAAGAGCGGGTTCAGAACCTACCTTCACCATTAGCCCAACTACAAAGGCGAGTTGACAAGGCCGAAGAGGAAAATGCTAAATTAAGGGAACAGCTAAAACAATCTGAGAGAAAGTGGGCTGAATATGAGGCAAAGATGAAATCAATGGAGGAAGCATGGCAAAAACAGAGAGCATCCTTGCAAATGAGTCTCGTTGCTGCTAGAAAGAGCCTTGCTTCTGATAGTGGCAATACTCAACCTACAAGAAATGAAGTCCTGTCTCCTCGGTACTATGGTTCTGAAGATGCTACCCTGGGATCTCGAACAGCTGTGAACACTCCAATAAAGTTTTCTAGCAATTTCGCTGTCTCTGATGGAGGCAGAGAGGCTAACGGGATCAGAGAAAGAGGGACAAGTGGTACTTTGAGCAGTCTGATGAAGGAATTTGACCAGCGAAGGCAGAACTTCGACGACGAAGTTAAAGCTCTGAATGATGTTAAACCAGGGAACTCCACCACCACAAATTCCATTGAAGAATTTCGTAAACTTAAGCAGAGTTTTGAGGGATGGAAGAAACAATACAAGGTTAGGTTACGCGAGACAAAAGCAAAGCTTCATGAAGCAGATAAAAGTCGGAGGACATGGTGGGGGAAATTAAAAAATTGA 1500 0.4173 MPSDSVQFLASCKCELLPLFSKMFDQSLKCSNSFGTGAVDSQEQSVCKKFKGQLFNLIDQLECTTPHFIRCIRPNTKQLPDIYDEDLVLQQLKCSGILEVVRTSRAGYPTRMTHQEFSTRYGFXLSEANKYQDPLSTSVAILQQFNIPSEMYQFGYTKLYLRAGQTGSLELKRKQVLQGIVVVQKYFRGYQARSYFQELKKGVATFQSFVRGEITRRKFGVMKPSITIYSKNLEEIQAIIQLQSVIRGWLARKDASTPNGFKSYPENAKHRRKSLVKMLEVKDISKERVQNLPSPLAQLQRRVDKAEEENAKLREQLKQSERKWAEYEAKMKSMEEAWQKQRASLQMSLVAARKSLASDSGNTQPTRNEVLSPRYYGSEDATLGSRTAVNTPIKFSSNFAVSDGGREANGIRERGTSGTLSSLMKEFDQRRQNFDDEVKALNDVKPGNSTTTNSIEEFRKLKQSFEGWKKQYKVRLRETKAKLHEADKSRRTWWGKLKN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2271 499 Gene3D - 223 348 - -
Amo13g2271 499 Gene3D Kinesin motor domain 65 107 IPR036961 -
Amo13g2271 499 ProSiteProfiles IQ motif profile. 199 227 IPR000048 GO:0005515
Amo13g2271 499 Gene3D - 178 222 - -
Amo13g2271 499 Gene3D - 108 175 - -
Amo13g2271 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 224 IPR027417 -
Amo13g2271 499 SMART iq_5 175 197 IPR000048 GO:0005515
Amo13g2271 499 SMART iq_5 234 256 IPR000048 GO:0005515
Amo13g2271 499 SMART iq_5 198 220 IPR000048 GO:0005515
Amo13g2271 499 ProSiteProfiles IQ motif profile. 178 205 IPR000048 GO:0005515
Amo13g2271 499 Coils Coil 296 337 - -
Amo13g2271 499 Coils Coil 469 489 - -
Amo13g2271 499 Pfam Myosin head (motor domain) 5 162 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo13g2271 499 ProSiteProfiles Myosin motor domain profile. 1 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo13g2271 499 SMART MYSc_2a 1 175 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo13g2271 499 Gene3D - 22 64 - -
Amo13g2271 499 PANTHER MYOSIN 3 497 - -
Amo13g2271 499 ProSiteProfiles IQ motif profile. 235 263 IPR000048 GO:0005515
Amo13g2271 499 Coils Coil 424 444 - -
Amo13g2271 499 Pfam IQ calmodulin-binding motif 180 197 IPR000048 GO:0005515
Amo13g2271 499 Pfam IQ calmodulin-binding motif 237 254 IPR000048 GO:0005515
Amo13g2271 499 PANTHER MYOSIN-2 ISOFORM X1 3 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2271 Amo-Chr13 38777213 38781977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2271 1 496 Myosins gene family AT5G54280 49.326 2.48e-152 464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2271 13 38777213 38781977 Amo13g2271 13 38777213 38781977 ECH