Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2040 ATGGCGTCTGGATCCTCAGGTCGCGGTAACTCGGGTTCCAAGGGTTTTGATTTCGGTTCCGATGATATCCTCTGCTCCTACGAAGACTTCGGTAACAGGGATTCCAATTCTTCCAATGGCAATCATTCCGATCCAGTTATCAACGCCAATTCAACTAAGGATTTTCACAAATCAAGGATGACGAGAGCATCAATGTTTCCTACTACTGCCTACAATCCYCCTGAAGATTCTCTAAGCCAAGATGTGATTGCAACTGTGGAGAAGAGCATGAAAAAATATGCTGACAACCTCATGCGATTTCTTGAGGGAATTAGTTCAAGGTTATCCCAATTGGAATTATATTGCTACAATCTTGACAAATCTATTGGAGAAATGAGATCTGATTTAAATCGTGACCATGGGGAGCAAGATTTAAAGCTCAAGGCKCTTGAAAAACATCTTCAAGAGGTTCATAGATCTGTACAAATTTTAAGAGACAAGCAAGAGCTAGCTGACACTCAGAAAGAATTAGCCAAGCTTCAACTTGCTCAGAAGGAATCATCTTCCTCAAGCCACTCAGAGGAGAGATCATCGCCTTCTACAACAGATCCTAAAAAGATTGATAGTGCATCTGATGCACACAARCAGCAGTTAGCTCTTGCACTTRCTCATCAAATTCCCCCACAGCAGCKGCCGCCGCAACCGGCTGCACCCCATGCTCAAGCTCCAGTAGCAAATGCGTCCCAAGCCACCCAACAGCCTACTTATTACATGCAGCAACCRCCCACTCCATTGCCAAACCCTCCAGCTGCTCCCCAGCTCTCTCAGAATCAGTATTTACCATTGACAAATCAACAATACCAAACACCCCAACTTCAACAAGACATGTCGCGGGTGACTCCACAACCAACACCATCTCAGGTAGCCCCATCCCCAGCTGTGCAACAGTTCCCTCAGTATCAGCAGCCACAGCAACAACAGCAYCAGCCGCAGCAGCCGCAGCCACCCCAGCAGCAGTGGGCTCAGCAGGTGCCATCTTCACAGCCTCCCTCAATGCCACCCCAGATAAGAACCCCCACATCCTACCCTTCCTATCTYCCAAGCCAACCAGCAAACCCAACTCCCCCCACTGAAACACTACCTAACAGCATGCCCATGCAGATGCCAGCATATTCTGGAGTTCCACAACCTGGTTCTAGCCGCGGCGATGCCATGCCTTATGGATACGGAGGAACTGCTGGCCGAACTGTTCCGCAGCAGCAACCTCCACCACAGCAGATGAAGGGCTCTTTCCCYGCACAACCAGGCGACATGTACGGTACTGCCAGCCCCCATCCAGCACTTCCTCCTCCAGCCAGRGCATACACGATGTATGAAGGCGAGGGAGGGAGGACACACCATCCACCCCAACCTCCTCCCCACTATGCTCAAGCTGGATACCCTCCATCAAGTGCTTCACTCCAGAARCCCGGCGGCCACAATCTCATGGGGAGGAATCCTAACCAGACACAGTTTATGCGCAACCACCCTTACAACGAGCTGATTGAGAAAATGGTGAGCATGGGATTCAGGGGTGATCATGTGGCAAGTGTGATCCAGAGGATGGAGGATAGTGGACAGCCAATTGACTTCAACTCTGTGCTTGACAGGTTGAATGTTCATGGCTCTGTGGGCCCCCAGAGAGGAGGATGGTCAGGGTGA 1680 0.4994 MASGSSGRGNSGSKGFDFGSDDILCSYEDFGNRDSNSSNGNHSDPVINANSTKDFHKSRMTRASMFPTTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLNRDHGEQDLKLKALEKHLQEVHRSVQILRDKQELADTQKELAKLQLAQKESSSSSHSEERSSPSTTDPKKIDSASDAHKQQLALALXHQIPPQQXPPQPAAPHAQAPVANASQATQQPTYYMQQPPTPLPNPPAAPQLSQNQYLPLTNQQYQTPQLQQDMSRVTPQPTPSQVAPSPAVQQFPQYQQPQQQQHQPQQPQPPQQQWAQQVPSSQPPSMPPQIRTPTSYPSYLPSQPANPTPPTETLPNSMPMQMPAYSGVPQPGSSRGDAMPYGYGGTAGRTVPQQQPPPQQMKGSFPAQPGDMYGTASPHPALPPPARAYTMYEGEGGRTHHPPQPPPHYAQAGYPPSSASLQKPGGHNLMGRNPNQTQFMRNHPYNELIEKMVSMGFRGDHVASVIQRMEDSGQPIDFNSVLDRLNVHGSVGPQRGGWSG* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2040 559 Coils Coil 140 176 - -
Amo13g2040 559 MobiDBLite consensus disorder prediction 173 190 - -
Amo13g2040 559 MobiDBLite consensus disorder prediction 191 205 - -
Amo13g2040 559 MobiDBLite consensus disorder prediction 474 498 - -
Amo13g2040 559 MobiDBLite consensus disorder prediction 265 339 - -
Amo13g2040 559 MobiDBLite consensus disorder prediction 359 375 - -
Amo13g2040 559 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 557 - -
Amo13g2040 559 MobiDBLite consensus disorder prediction 168 498 - -
Amo13g2040 559 Pfam UBA-like domain (DUF1421) 504 548 IPR010820 -
Amo13g2040 559 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 557 - -
Amo13g2040 559 MobiDBLite consensus disorder prediction 1 54 - -
Amo13g2040 559 MobiDBLite consensus disorder prediction 30 54 - -
Amo13g2040 559 MobiDBLite consensus disorder prediction 237 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2040 Amo-Chr13 31620261 31624897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2040 63 236 Trihelix Transcription Factor Family AT5G14540 32.022 3.22e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2040 - - adu:107478128 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2040 13 31620261 31624897 Amo13g2040 13 31620261 31624897 ECH