Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0451 ATGGTTTTCTCTTCTATTCCAGTCTATGTAGATCCTCCCAATTGGCAGCAGCAAGGGAATGTCAATGATAACCCTCACCTACTTCCGCCGCTACCCCCACAGGTTCAGGCAGGACCTGTGGGAGGAGGCGGCGCAATTGCTGGCTCGATCAGACCTGGGTCAATGGCTGATCGAGCCAGGCTAGCAAAGATACCACCTCCAGAGGCTGCCCTCAAGCGCTACTGGACAAAAGGTGGCACTCTGAGGAACGTTCCGGTGGGSGGTGGTTGCCGCCGTAACAAGAAGAACAAGAGGAGTAGTAGCCGSTCGAAATCTCCACCAAACAATAACAATGAAAAGCAACAATCWTCGAGTGCAATTCCTTCAAACAACATCCCTCCTCATGAGCTGATTGGTCATCATCAGTTATCTCATCAACCACCACCAAACCTTCCTTTCATGGCTTCTCTCCAGAATCATCTTAGCCGCTATGGTGGGGGAGGAGGAGTTGCTTCAAACATGGGTCTGAGCTTAACGGATCATCATCCTCACATGGGGTTTGTTGGTAATGGAGGAGTAGTGGATCAGTGGCGGCTGCAGCAGTTTCCGTTCTTAAACGGTTTTGATTCGAATTCTTCTTCAGCTGCAGTAGCATCGTCGATATCATACCCTAACACTTTTCATCATGAAAATGATCATCATCAAGGTATTGGTGGTGGTGAAGCAGTAGGTTCTTCAGGCTTGGTTGTTGGTGTTGACATAGCTGGAAATTCTAGGGTTAATAATAATCAGATGCAACCACCAGTGAAAATGGAAGAAAACGGAGCCATGAATTTGTCATCAAGAACAACAACAACCAACTTGAATGTCTCTCATCATCATCAAAATCATCAATACTATTCTTGGAACACTGATATGTCAGCTCTAGCTGCTTCTTCTTCCACTCCTCATAATCTCTTATAA 942 0.4628 MVFSSIPVYVDPPNWQQQGNVNDNPHLLPPLPPQVQAGPVGGGGAIAGSIRPGSMADRARLAKIPPPEAALKRYWTKGGTLRNVPVGGGCRRNKKNKRSSSRSKSPPNNNNEKQQSSSAIPSNNIPPHELIGHHQLSHQPPPNLPFMASLQNHLSRYGGGGGVASNMGLSLTDHHPHMGFVGNGGVVDQWRLQQFPFLNGFDSNSSSAAVASSISYPNTFHHENDHHQGIGGGEAVGSSGLVVGVDIAGNSRVNNNQMQPPVKMEENGAMNLSSRTTTTNLNVSHHHQNHQYYSWNTDMSALAASSSTPHNLL* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0451 313 MobiDBLite consensus disorder prediction 81 145 - -
Amo13g0451 313 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 13 72 - -
Amo13g0451 313 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 72 306 - -
Amo13g0451 313 MobiDBLite consensus disorder prediction 102 124 - -
Amo13g0451 313 Pfam Dof domain, zinc finger 72 95 IPR003851 GO:0003677|GO:0006355
Amo13g0451 313 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 13 72 IPR045174 GO:0003700|GO:0006355
Amo13g0451 313 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 72 306 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0451 Amo-Chr13 5882791 5884085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0451 46 232 C2C2-Dof Transcription Factor Family AT3G55370 31.923 1.69e-17 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Amo13g0451 zf-Dof 9.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0451 - - aip:107629110 521.931