Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo12g2074 | ATGCCACTTCCTGATATGATGGCTGCTGTGCTGGCTATGGATGAATCAGTATTAGATGTAGATCAGGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAGAAGAGATGGAACTTTTGAAGGGATACACTGGTGACAAAGAGAATTTGGGAAAATGCGAACAGCTGATGAAGGTGCCACGAGTAGAGTCAAAGTTAGGAGTATTCTCTTTCAAGATTCAATTTCTGTCTCAGGTTACAGAATTTAAGAAGAGTTTAAAAACTGTGAACTCTGCTTGTGAAGAGGTTCTAGCTGAAAGGTCGCCTGGACTGCTTGACTTCCACTTAGACCTTGTAAGCCTGGAAGCTGCGACTAAGGTGATGATTTATGCTTGGTTGGAAAAAGAAAATTATTCAACTGCTAATTGCTAG | 408 | 0.4044 | MPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKENLGKCEQLMKVPRVESKLGVFSFKIQFLSQVTEFKKSLKTVNSACEEVLAERSPGLLDFHLDLVSLEAATKVMIYAWLEKENYSTANC* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo12g2074 | 135 | Gene3D | Formin, FH2 domain | 1 | 99 | IPR042201 | - | |
| Amo12g2074 | 135 | Pfam | Formin Homology 2 Domain | 1 | 98 | IPR015425 | - | |
| Amo12g2074 | 135 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 1 | 118 | - | - | |
| Amo12g2074 | 135 | PANTHER | FORMIN-J | 1 | 95 | - | - | |
| Amo12g2074 | 135 | PANTHER | FORMIN-J | 95 | 122 | - | - | |
| Amo12g2074 | 135 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1 | 135 | IPR015425 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo12g2074 | Amo-Chr12 | 97075466 | 97077483 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo12g2074 | 1 | 99 | FH2 protein (formin) Gene Family | AT5G07740 | 80.583 | 4.19e-50 | 169 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo12g2074 | - | - | ahf:112727809 | 189.889 |