Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0713 ATGCGGTGGATACACCTTACGTTTACCAAAGACAAAGACAAAAACAACTATTACGCTTCTTCTTCTTCTTCCTCCTCCTCTTCTTCTTCTTCCGTCGTTGAAAACCACAAGAAAGCATGGCGGTTCCGCAACGGGAACAAGAAGCGTCTCAACAACGATGGAAAGTCCGCTAACAGTTACAAGAAGCATGTTGACGTGGAAGAGGAGGCTGCCGTGGCGATTACGACAACCTCTCCTTCCGGCATTCGCACCACATCCACCTCCTCCTCTGCGTCAGCGTCTTCCTCCGCCATGCCTCTCCCGTTGCCTTTGCCGCAGCGTGATGCAGAATGTCGCCAACCGTCACCTGTAAGAACCTCCAGCGGCGCTAGCTCCAATGGCTATCGATCCGCGGAGGATCGCGATCAAACTGATGCTGCGGCAGCTGTCAACGGTTCATCCTTCACGGGCTTCAAGATGAGGAGTGTTTTTGCTAGCAACAGAGACACAAGGCGGAAGGCTGATCAGGTAGAAAATCGCTTGTCACCGAGATCTCAAGAAAACTATTGCTTAAGCCACTCCGGCAGGAGTGGTTCGAGTAGTCCCTTTGCAAGTCCCAAGATCAGTCCGTGTAGCACAGATGATTTCGTGCCATATCATTATGTGGCTCCAAAAGGAAACCAATTCTGGTCTGCACCGGAGATAACTAATTCAGAATCATCCATTCATCCAATCTTTGATTTATCGGCGTCTGGCACCGAAACCTCGCCAAAGGGAAGACCTCAGCTACTCCATGTTAAGAGCTCAAGTGGACCTCCATCACCCTTGCACGGCGGCATGATGAATGAGACTGCATCAGCGCGCCGGGCTGAAGGTAATTCTGTCAGTGTCCACCGTTTACCCCTGCCTCCCATGCCCAACTCACCTACCCTAACCGCTGCAACTACCTACTCCCACGCCCCGGGGAGATCAGAATCTTTGCCAATGAAAAGCCAATGGAAGAAAGGGAAACTTATTGGTCGTGGCACGTTTGGAAGTGTTTATGTTGGCACTAATAGAGAAACTGGAGCATTGTGTGCTGTGAAAGAAGTAGAATTATGTCACGAGGATCCAACTTCCATAGAGTCTATAAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAACTGAAACATTCAAATATTGTGCAGTACTATGGTAGTGAAGTAGTTGAAGACAAATTCAATATTTATCTGGAATATGTACATCCTGGTTCAATTAATAAATATGTCCGCGACCATTGTGGCGCCATAACAGAATCGGTCGTTAGGAATTTTACTCGCCATATTCTTTCGGGGTTGGCATACTTGCATAGCAAGAAAACAATTCATAGGGACATTAAAGGGGCTAATTTGCTTGTCGATTCGGCAGGAGTTGTCAAACTTGCTGATTTTGGAATGGCAAAGCATCTTAATGGATATGAAGGTAATCTCTCTTTGAAGGGAAGTCCATATTGGATGGCTCCAGAGCTTATGCAGACTGTTGTTATGCATAAGGATAACAACTCGGATCTAGCTTATGCTACTGATATTTGGAGCCTCGGTTGTACAATCATTGAAATGTTCAATGGGAAGCCTCCATGGAGCGAGTTCGAAGGACTCTGTCTAAATTATAAGCAAATAATAGTACATGATAAGTTTTTAAGACGATGTTTGTGTACAATACATAAATCGGAGGGTCCGATTATTGTTAAAAAATTAGAAAAAATCAGAGTACACAACTCGGACCATGCGATTGAAAAAAAATTCAGAGTACATAAATCGGAGGGTCCGATTAGTGTTAAAAAAATTAGAAAAAAAGAGTACACAAGGACACGTCGGACCATGCGAGTTCTTTGGTCATGA 1863 0.453 MRWIHLTFTKDKDKNNYYASSSSSSSSSSSSVVENHKKAWRFRNGNKKRLNNDGKSANSYKKHVDVEEEAAVAITTTSPSGIRTTSTSSSASASSSAMPLPLPLPQRDAECRQPSPVRTSSGASSNGYRSAEDRDQTDAAAAVNGSSFTGFKMRSVFASNRDTRRKADQVENRLSPRSQENYCLSHSGRSGSSSPFASPKISPCSTDDFVPYHYVAPKGNQFWSAPEITNSESSIHPIFDLSASGTETSPKGRPQLLHVKSSSGPPSPLHGGMMNETASARRAEGNSVSVHRLPLPPMPNSPTLTAATTYSHAPGRSESLPMKSQWKKGKLIGRGTFGSVYVGTNRETGALCAVKEVELCHEDPTSIESIKQLEQEIKVLSQLKHSNIVQYYGSEVVEDKFNIYLEYVHPGSINKYVRDHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLNGYEGNLSLKGSPYWMAPELMQTVVMHKDNNSDLAYATDIWSLGCTIIEMFNGKPPWSEFEGLCLNYKQIIVHDKFLRRCLCTIHKSEGPIIVKKLEKIRVHNSDHAIEKKFRVHKSEGPISVKKIRKKEYTRTRRTMRVLWS* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0713 620 MobiDBLite consensus disorder prediction 36 62 - -
Amo11g0713 620 MobiDBLite consensus disorder prediction 159 199 - -
Amo11g0713 620 ProSitePatterns Protein kinases ATP-binding region signature. 332 355 IPR017441 GO:0005524
Amo11g0713 620 ProSiteProfiles Protein kinase domain profile. 326 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0713 620 MobiDBLite consensus disorder prediction 14 35 - -
Amo11g0713 620 SUPERFAMILY Protein kinase-like (PK-like) 316 549 IPR011009 -
Amo11g0713 620 Gene3D Transferase(Phosphotransferase) domain 1 322 601 - -
Amo11g0713 620 MobiDBLite consensus disorder prediction 77 99 - -
Amo11g0713 620 SMART serkin_6 326 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0713 620 MobiDBLite consensus disorder prediction 77 142 - -
Amo11g0713 620 Pfam Protein kinase domain 327 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0713 620 MobiDBLite consensus disorder prediction 244 274 - -
Amo11g0713 620 MobiDBLite consensus disorder prediction 113 130 - -
Amo11g0713 620 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 540 - -
Amo11g0713 620 MobiDBLite consensus disorder prediction 159 173 - -
Amo11g0713 620 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 540 - -
Amo11g0713 620 MobiDBLite consensus disorder prediction 174 199 - -
Amo11g0713 620 MobiDBLite consensus disorder prediction 14 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0713 Amo-Chr11 14334333 14341730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0713 36 581 MAP Kinase Kinase Kinase AT5G66850 47.804 7.64e-157 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo11g0713 Pkinase 3.2e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0713 - - gmx:100790701 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0022 01 781238 785960 Amo11g0713 11 14334333 14341730 hybridization
Amo05g1017 05 13329598 13332805 Amo11g0713 11 14334333 14341730 PCT
Amo11g0713 11 14334333 14341730 Amo05g1017 05 13329598 13332805 PCT