Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0802 ATGGGAAAACGTAATTCTCAACGGAAATGTGCTGCAATGTTCGATACCGATGATGATAGTAGCGTGACTTCGTCATCGACTTCGCGTTCTGATATGATGTCGGTGTATGGGGGTGAAGATGTGCAATTTTATCAAGATTCTGTTCTCGACCAAGCTCTGGATGCCTTAGATGAGAAAAGGGGTTCCACAAGGGAGAATGCTTTGTCATCGATCATTGATGCATTCAATAGCAATATTCAGCATGATTTTGTGGAGAAGAAATTTGCTACCTTACTACACCATTGTCTTGCTTCATTAAAAAAGGGATCTAAAAAAGCATCTGCTAAGGAGATATCTTTGGCATCACACGCCATTGGTTGTTTGGCCTTGACTGTTGGATGCGGCAATAATGCACGTGAAATATTTGAAGAATCAGTTCGTCCTCTAGATGAATCTCTTGCGTCCAAGTCAGATGTTTCAAAGTTGCTTGAATGTTTGGCTATAATAACCTTTGTTGGAGGGATCGATCAAGAAGAAACAGAACAGTCAATGGACATCATGTGGCGAGTGATCCATCCCAAATTAGGTTCCAATGTGGTTGCAGTCAAACCATCTGCCCAATTAATAACTTCTGTGGTGTCTTCGTGGTCTTTTCTCCTCTCTACCATGGACGATTTGAACCTAAATTCAAAAAATTGGCAAAATCAAATATCTTATTTATCGGGTCTTCTGGACAAGGAAGATCGGACTGTACGAATTGCTGCTGGTGAAGCTTTGGCTCTTATTTTTGAGATTGGAACTACAGAGAAATTTTATACTGATTCTAGGAGTGCAGAAGAGAGTAAAACACAAGAAAGTTACATATGTTTACAAGGATTGAAAGGGAAGGTCATAAATCAATGCAGAAACCTTTCTGTGGAGGCCGGTGGCAAGGGTTCTGCCAAAAAGGATCTTAATAACCAGAGGAACTTGTTCCGAGATATTTTAGAATTTTTTGAGTATGGTTACTCCCCCGAAACTTCAACAAAGATTGGTGGTGATTCCTTGCAGACATCATCGTGGTCCCAAATGATTCAGTTAAATTTTCTCAAACACTTTCTTGGGGGTGGGTTTATTAAGCATATGCAGGAAAATGAGTTCCTTCATGATGTCTTTGATTTCACGCCGAAGAGAAAGTTCAATAATAACGAACAGAGAATGTCTGGTGGTGAGAAGAGATTGTTTAAGTCTCCAAATTCAGTACTGAACAAGGCTAGAACCCAACATCTTAATAAGCAGCGTTTGCAAGCTGAGGGAAGGAACTTCGGCCACTACGCTGTCGGTGTCCCCGAGGAGGAGGCTTGA 1323 0.4104 MGKRNSQRKCAAMFDTDDDSSVTSSSTSRSDMMSVYGGEDVQFYQDSVLDQALDALDEKRGSTRENALSSIIDAFNSNIQHDFVEKKFATLLHHCLASLKKGSKKASAKEISLASHAIGCLALTVGCGNNAREIFEESVRPLDESLASKSDVSKLLECLAIITFVGGIDQEETEQSMDIMWRVIHPKLGSNVVAVKPSAQLITSVVSSWSFLLSTMDDLNLNSKNWQNQISYLSGLLDKEDRTVRIAAGEALALIFEIGTTEKFYTDSRSAEESKTQESYICLQGLKGKVINQCRNLSVEAGGKGSAKKDLNNQRNLFRDILEFFEYGYSPETSTKIGGDSLQTSSWSQMIQLNFLKHFLGGGFIKHMQENEFLHDVFDFTPKRKFNNNEQRMSGGEKRLFKSPNSVLNKARTQHLNKQRLQAEGRNFGHYAVGVPEEEA* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0802 440 MobiDBLite consensus disorder prediction 1 30 - -
Amo08g0802 440 Gene3D - 13 279 IPR011989 -
Amo08g0802 440 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 2-LIKE ISOFORM X1 1 434 - -
Amo08g0802 440 SUPERFAMILY ARM repeat 37 261 IPR016024 -
Amo08g0802 440 Pfam Interferon-related protein conserved region 371 420 IPR006921 -
Amo08g0802 440 Pfam Interferon-related developmental regulator (IFRD) 24 326 IPR007701 -
Amo08g0802 440 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 1 434 IPR039777 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0802 Amo-Chr8 14159238 14162938 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0802 08 14159238 14162938 Amo17g2875 17 130875055 130879153 hybridization
Amo16g3808 16 149761611 149767316 Amo08g0802 08 14159238 14162938 PCT
Amo08g0802 08 14159238 14162938 Amo16g3808 16 149761611 149767316 PCT