Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0380 ATGGAAGATGGTGAGATAGAGGAAGTTTCAGCACATGCGGTGGAGGAAGACGACCAAGGATTTTCGCATTCCTCACAAAACCGCACGCCAGAGGAATCACCCTACGAAATGCTGCAGAACAGCAAGACCTCCGTCGAAAACATTGTCACCGAAATCCTCTCTATCAAGAAACACGCCAAACCCAAGCACCTCCTTCGCGAGCTCATTACTCAGATGTTCCTTCACTTTGTTACTCTCCGCCAGGCGAATAGGTCTATTCTGACGGAGGAAGACCGTGTCAAATCGGAAACGGAACGCGCCAAGGCACCGGTGGACTTAACGACGCTGCAGCTTCATAACCTGATGTACGAGAAGAGTCACTATGTTAAGGCGATTAAAGCTTGCAATGATTTCAAGTCTAAGTATCCTGACATTGAGCTTGTTCCTGAGGAAGAGTTCTTCCATGACGCTCCTAAAGATATCAAGGACTCTGTTTTGTCGAATGACGCTGCTCATAATCTCATGCTTCAGAGGCTCAATTTTGAGTTATTCCAGCGCAAAGAGCTCTGCAAACTTCATGAGAAACTGGAACAGAAAAAGAAAAGCCTTCTGGAGAGTATAGCAAACCGAAAGAAGTTCCTGACAAGTCTCCCCTCGCATCTTAAGTCTCTTAAGAAAGCATCGTTACCTGTACAAAACCAACTAGGAGTGCTTCATACTAAGAAACTGAAGCAGCATCATTCAGCAGAGCTGCTTCCACCTTCTCTTTATGTGATTTATTCACAGCTGTTTGCTCAAAAGGAAGCCTTTGGTGAATCCATTGATCTGGAGATTATAGGAAGCCTGAAAGATGCTCAAGCTTTTGCTCGTCAACAAGCTCACAATGACACTGGTATTTCCTCTGCTACGGAGAGTTCCAAATTGGAAGATGATGCACCGGATGAAGAAGAAGATGATCAAAGGCGAAGAAAAAGGCCAAGGAGGGTTCAAGGCAAGGAGAGTCTTGATCAAGCAGGAATATTTCAGGCTCACCCGCTTAAAGTAATTATCCATGTGTATGACGATGAGGCATCTGATACTAAGTCTACAAGACTCATTACTCTGAAGTTTGAGTATTTGGTGAAGTTGAATATTGTATGTGTTGGAATAGAAGGATCTAATGATGGTCCTGAAAATGACATCTTATGCAATTTATTCCCCAATGATACAGGGCTCGAGCTTCCTCACCAGTCAGCCAAACTCTTTGTTGGGGATGATGCTACATTCAATAATCAAAGGACTTCACGTCCTTACAAATGGGCTCAGCACCTAGCAGGACTGGACTTCCTGTCTGAGGTGTCCCCGTTGCTTCATACTGGTCATGGAACTTCTGACAATAGTGGAGCAGCCAAGAGTGATGATGTTGTATCTGGTCTTTCATTATATCGCCAGCAGAACAGAGTACAGACAGTTCTGCAAAGAATTCGCTCAAGGAGAAAAGCTCACTTGGCTCTATTGGAACAACTAGAATCTCTGACAAAGCTTGAATGGCCTTTTTTGTCCTGTAAGAGTGTTCCGTGGGCTTTGCACGCTCCTTTGTGCAATTTGAATGTTTGGTCACCCATACGAGCCATAGATGTACCTCGCGTGGCTTCAACTCCAGCTCTCATGGATAAAGATGAGCATGCTCCAGAAGCAATGGATATTGATAGAGCTGAACATTCTGTTGCCACAAAGGAAGAACTGGAGAGTATAACAGAAGATGGGGAGCTCCCAACATTGATTCCCAACATGTCTAAGTTAGATCACTCCAAGCAAATTACCTTAATTTCAAAAAGTGTCACACCTTCACTGATTAATGTTAGGTCACAAAGCTTCAAAAAATTCGAAGAAATTGAAAGTGATATTGATGAGCCAGCACAAATTGAACAGGAAGATGAAGATATAGAATCGTATCATTATGGCAGAAAGTCTGTGTCATGGATGGACTGTGGGGTCAAGGAATTTTCCCTTGTTCTCAGCAGAAAATTCAGTGCAGATGAGTCAAATGTGAATTTAGAGGCAAAGATCAATATCAGTATGGAGTATCCTCTAAGGCCTCCACTTTTTGCACTGAGTCTACGCTGCCTATCCACTGGGGGAGACCATTATCAGAATGATGGATTGGAGTGGTACAATGAACTACGTGCTATGGAAGCAGAGGTCAATCTTCACATTCTAAAGATGCTACCAGTCGACCAGCAAAATTATGTATTGGCTCATCAAGTGCGCTGTCTTGCTATGTTGTTCGACCATTATTTGGATGATGCATCACCAACATCTGAAAGGACAAGTAGTACTACCTTGGTTGATGTTGGCTTGTGTAAGCCTGTCACCGGCAGCTTTCTGGCAAGATCATTTAGAGGAAGGGATCGCAGGAAGATGATCTCCTGGAAGGGCACGAAGTTCACTTCCAGCTGTTCCTAG 2424 0.4389 MEDGEIEEVSAHAVEEDDQGFSHSSQNRTPEESPYEMLQNSKTSVENIVTEILSIKKHAKPKHLLRELITQMFLHFVTLRQANRSILTEEDRVKSETERAKAPVDLTTLQLHNLMYEKSHYVKAIKACNDFKSKYPDIELVPEEEFFHDAPKDIKDSVLSNDAAHNLMLQRLNFELFQRKELCKLHEKLEQKKKSLLESIANRKKFLTSLPSHLKSLKKASLPVQNQLGVLHTKKLKQHHSAELLPPSLYVIYSQLFAQKEAFGESIDLEIIGSLKDAQAFARQQAHNDTGISSATESSKLEDDAPDEEEDDQRRRKRPRRVQGKESLDQAGIFQAHPLKVIIHVYDDEASDTKSTRLITLKFEYLVKLNIVCVGIEGSNDGPENDILCNLFPNDTGLELPHQSAKLFVGDDATFNNQRTSRPYKWAQHLAGLDFLSEVSPLLHTGHGTSDNSGAAKSDDVVSGLSLYRQQNRVQTVLQRIRSRRKAHLALLEQLESLTKLEWPFLSCKSVPWALHAPLCNLNVWSPIRAIDVPRVASTPALMDKDEHAPEAMDIDRAEHSVATKEELESITEDGELPTLIPNMSKLDHSKQITLISKSVTPSLINVRSQSFKKFEEIESDIDEPAQIEQEDEDIESYHYGRKSVSWMDCGVKEFSLVLSRKFSADESNVNLEAKINISMEYPLRPPLFALSLRCLSTGGDHYQNDGLEWYNELRAMEAEVNLHILKMLPVDQQNYVLAHQVRCLAMLFDHYLDDASPTSERTSSTTLVDVGLCKPVTGSFLARSFRGRDRRKMISWKGTKFTSSCS* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0380 807 MobiDBLite consensus disorder prediction 286 327 - -
Amo08g0380 807 Pfam Fms-interacting protein/Thoc5 78 435 IPR019163 -
Amo08g0380 807 PANTHER FMS INTERACTING PROTEIN 16 803 IPR019163 -
Amo08g0380 807 Coils Coil 478 498 - -
Amo08g0380 807 MobiDBLite consensus disorder prediction 23 39 - -
Amo08g0380 807 Coils Coil 179 199 - -
Amo08g0380 807 MobiDBLite consensus disorder prediction 1 39 - -
Amo08g0380 807 MobiDBLite consensus disorder prediction 310 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0380 Amo-Chr8 7397042 7401148 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3841 16 150185605 150189141 Amo08g0380 08 7397042 7401148 PCT
Amo08g0380 08 7397042 7401148 Amo16g3841 16 150185605 150189141 PCT