Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0174 ATGGGTTCTGTTTCTCTGAAGATAGGCGATGGAACTGCGAGATTCMAGAGTGCCACTGTGTGTTCTTCAGCTGTCAACATCCTCATGATATTCTCCGTTATCACCACCAACCTCTTCGCMCTCTACGCTTTCACCGCTTCCAACAAACACCACCAAAGCCAGCACCTTCTCCTCCAGCATGCTCACAAGAACTTCTCCCTCATCTCCGAGCAGGTCCAGCTCATACTCAACGAGATCGATTCCTCTCAGAAGARGCTTGCCCAGATGGAGAAACAGCTTCTCGGTTACGATACCATCGATCTTTCAAGGCCCAACATTGCACCCGAGCTCAAACTCTTTCTCCAGCAACACCAGCTCCCTCTCGGCAARGATTCCAAGACTGGAATCACTGAGATGGTGCCATCTGTTGGCCATTCCTGCGAGAAATCCTCCGACTTGTTGTCTCAGTACATGAYTTACAAGGTTTATGGAAGCTGCCAAGATGATTGGATTTTGGCGCAGAAGCTTATCTTGCGTGCCTGTGAGCCTTTGCCTCGAAGAAGGTGTTTTGCTAAGGTCGTTTCCAAGGTCGGCCTTTATCCTTTTCCTGATTCACTTTGGAAACCTGTTGCTAATAAAACTGTTAACTGGAGTGGTCTTAGTTGTAAGAATTTCCAGTGTTTGAATGGGAAGAAGTTGAATAGAGAGTGTATTGGCTGTTTTGATTTGCTTAATGGTTATGAGAGTCAGAGGTTTGTTAAGGCTAGGGGTAAGAATGACTTTCTCATTGATGATGTGTTGGAACTGGGAAGTGGTGGAATCAGAGTTGGGCTTGATCTTGGAGGTGGCTCTGGCTCCTTTGCTGCTAGAATGGCCGAAAGGAATGTAACTGTGATTACTAGTACTCTGAATGTTGATGCCCCTTTCAGCGAATTCATTGCGGCAAGGGGATTATTCCCTCTTTACTTGAGCTTAAATCATAGGTTCCCGTTCTATGATAATGTGTTTGACTTGGTCCATGCTGCAAGCTCCTTGGATGTTGGTGGGAAACCAGAGAAGTTAGAGTTTTTGATGTTCGACATTGATCGCATTTTGCGCCCAGATGGCTTGTTTTGGCTGGACAACTTCTATTGCACAAGCGATGAGAAGAAGAGAGAACTGACTCGGTTGATCGAAAAGTTTGGATATAAAAAGTTGAAATGGGTTGTGGGAGAGAAAATTGATAGTCTTGGATCAGGCAAGTCTGAAGTTGTCTTATCTGCTGTTCTTCAGAAGCCAGTAAGGGTGTAA 1269 0.4523 MGSVSLKIGDGTARFXSATVCSSAVNILMIFSVITTNLFALYAFTASNKHHQSQHLLLQHAHKNFSLISEQVQLILNEIDSSQKXLAQMEKQLLGYDTIDLSRPNIAPELKLFLQQHQLPLGKDSKTGITEMVPSVGHSCEKSSDLLSQYMXYKVYGSCQDDWILAQKLILRACEPLPRRRCFAKVVSKVGLYPFPDSLWKPVANKTVNWSGLSCKNFQCLNGKKLNRECIGCFDLLNGYESQRFVKARGKNDFLIDDVLELGSGGIRVGLDLGGGSGSFAARMAERNVTVITSTLNVDAPFSEFIAARGLFPLYLSLNHRFPFYDNVFDLVHAASSLDVGGKPEKLEFLMFDIDRILRPDGLFWLDNFYCTSDEKKRELTRLIEKFGYKKLKWVVGEKIDSLGSGKSEVVLSAVLQKPVRV* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0174 422 Coils Coil 72 84 - -
Amo08g0174 422 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 264 366 IPR004159 GO:0008168
Amo08g0174 422 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 244 391 IPR029063 -
Amo08g0174 422 Coils Coil 86 92 - -
Amo08g0174 422 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 1 422 - -
Amo08g0174 422 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 1 422 - -
Amo08g0174 422 Gene3D Vaccinia Virus protein VP39 234 401 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0174 Amo-Chr8 3019694 3021224 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0174 08 3019694 3021224 Amo17g2165 17 111498373 111499984 hybridization
Amo06g0737 06 10456245 10457991 Amo08g0174 08 3019694 3021224 PCT
Amo08g0174 08 3019694 3021224 Amo06g0737 06 10456245 10457991 PCT