Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0085 ATGGGAGCCGAACAACCGTTCCCGGAAGCAGAAGCAGAGGCTTCCATGGTGGTGGGTCTCCAACCCTCAGCCATGGTCGACACCATCGCCCTCGTTGACTCCTCCTTCCTCGATGGAATTCCCGGCGAACGCGGTGGCTCCATTCCCGTTGGCATTGAAGAGCTTGATTATATACGGAGAGAGCTGAAAGAGGATCACGGTGAGAAGACCATCGCTGGAGGCAGTGTTGCCAACACCATCCGCGGCCTGCGCACTTCCTTCGGAATTACCACTGCAATTATTGCTGCCTACGGGGATGACCACCAGGGGAACCTCTTTCTCAACAACATGAGCTTCAATGGAGTCAACCTCTCCTGCCTCCGCAAGAAGAAAGGCCACACTGCTCAATGCGTCTGCTTGGTTGATCACTCAGGCAACCGTACTATGCGTCCCTCTCTCTCCAATGCTGTCAAAGTTCAGGCACACGAACTCGTTCGAGAGGACTTCAAGGGTTCCAAGTGGCTGGTTTTGAGGTATGCAATTCTCAATTTGGAAGTTATTCAAGCAGCAATCTCTTTGGCCAAACAGGAAGGTCTTCTTGTTTCTTTGGATTTGGCCAGTTTTGAGATGGTGAGGAAATTTAAGCCACCACTTATGAAGTTATTGGAGTCTGGCAATATAGACCTCTGTTTTGCCAATGAGGATGAAGCAACGGAACTTCTAAGGGATGAGCATAATGCCGATCCAGTTGCTGCTGTAGAATTTCTAGCTAAGTATTGCAAATGGGCTGTGGTAACTTTGGGCCATAATGGATGCATTGCTAAACATGGCAAGGAGATGGTACGTGTCCCGGCCATAGGAGAAGCAAAAGCAATAGATGCTACTGGAGCAGGGGACCTTTTTGCTAGTGGATTTTTGTATGGAATGGTGAAGGGTTTGTCCCTTGAAGAATGTTGCAAAATAGGTGCATGTAGTGGCGGATCTGTTACCCGCTCTCTTGGTGGTGAGGTGACATTAGAGAATCGGCAATGGCTGTACAAGCAGATGAAGATAAGAGATCTTCACATGCCTGATGGCATATGCGAATGA 1068 0.4906 MGAEQPFPEAEAEASMVVGLQPSAMVDTIALVDSSFLDGIPGERGGSIPVGIEELDYIRRELKEDHGEKTIAGGSVANTIRGLRTSFGITTAIIAAYGDDHQGNLFLNNMSFNGVNLSCLRKKKGHTAQCVCLVDHSGNRTMRPSLSNAVKVQAHELVREDFKGSKWLVLRYAILNLEVIQAAISLAKQEGLLVSLDLASFEMVRKFKPPLMKLLESGNIDLCFANEDEATELLRDEHNADPVAAVEFLAKYCKWAVVTLGHNGCIAKHGKEMVRVPAIGEAKAIDATGAGDLFASGFLYGMVKGLSLEECCKIGACSGGSVTRSLGGEVTLENRQWLYKQMKIRDLHMPDGICE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0085 355 Pfam pfkB family carbohydrate kinase 59 327 IPR011611 -
Amo08g0085 355 CDD adenosine_kinase 16 327 - -
Amo08g0085 355 SUPERFAMILY Ribokinase-like 22 328 IPR029056 -
Amo08g0085 355 PANTHER SUGAR KINASE 9 345 - -
Amo08g0085 355 PANTHER CARBOHYDRATE KINASE-LIKE 9 345 - -
Amo08g0085 355 Gene3D - 17 335 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0085 Amo-Chr8 1791734 1794252 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0085 08 1791734 1794252 Amo17g2242 17 115005165 115007803 hybridization
Amo16g3984 16 151800908 151804733 Amo08g0085 08 1791734 1794252 PCT
Amo08g0085 08 1791734 1794252 Amo16g3984 16 151800908 151804733 PCT