Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2424 ATGATGGGTGGGAACCCTAACCCTAACTGGTGGAATATCCCTCATCATCATCATCAGTATCTTGTTTGCAGCACTGGGGAAGATGACTATTCACACATCAACATTAACATGAACTTGCTAGATTTCACTTGTAGCAAGAAGCTACCACCATCACCACCAGCAMTATCCTACAAGTGTAATAGTAGTAGAATTATTAGCACTAACAAGAACAAGAACAAGAAAGGTAGGGTTTCAAGCCAACAACATCTCATCAAGGTGAGAAAGGAGAAGCTTGGTGATAGAATCACATCCCTTCATCAACTTGTTTCTCCATTTGGAAAGACTGACACAGCTTCCGTTCTATTGGAAGCAATTGGATATATAGGATTCCTTCACTCTCAAATTCAGGCACTGACCTCTCCTTATTTGGACAACACCAATAATCCACACTCTGTAATTGATGGAGAAGATAGTAAGAATAAGGAAAAGGACTTAAAGAGTAGAGGCTTGTGCTTGGTTCCAATATCATGCACCCAACATGTTGGAACTCAAGATTATCATCATGCTGCCGATTACTGGCCATCACCATTTGCCACCGGATTTTAA 585 0.4068 MMGGNPNPNWWNIPHHHHQYLVCSTGEDDYSHININMNLLDFTCSKKLPPSPPAXSYKCNSSRIISTNKNKNKKGRVSSQQHLIKVRKEKLGDRITSLHQLVSPFGKTDTASVLLEAIGYIGFLHSQIQALTSPYLDNTNNPHSVIDGEDSKNKEKDLKSRGLCLVPISCTQHVGTQDYHHAADYWPSPFATGF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2424 194 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 39 179 - -
Amo07g2424 194 PANTHER TRANSCRIPTION FACTOR BHLH68 39 179 - -
Amo07g2424 194 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 135 IPR036638 GO:0046983
Amo07g2424 194 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 124 IPR011598 GO:0046983
Amo07g2424 194 CDD bHLH_AtbHLH_like 85 131 IPR045239 -
Amo07g2424 194 Gene3D - 67 141 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2424 Amo-Chr7 71234829 71236063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2424 69 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 48.905 4.32e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2424 - - ahf:112703662 379.407