Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0409 ATGATGATGTTTGATGACATGGGGTTTTGTGGAGATTTGGATGTTTTATGCGGTCCCCTCGGCGAATCGGATATGACTGCCAGACAGACTGAGCCTGATGCAGTGGTGGAGGATGATTATAGCGACGAAGAGATCGATGTGGATGAGCTTGAGAGAAGGATGTGGAGGGACAAAATGCGTCTCAAGAGATTGAAAGAGCAAAGCAAGGCTAAAGAAGGCATCGATGCGGCGAAGCAAAGGCAATCCCAAGAACAAGCTAGGAGGAAAAAGATGTCAAGAGCTCAGGATGGGATACTCAAGTATATGCTGAAGATGATGGAGGTTTGCAAGGCTCAGGGATTCGTCTATGGGATTATACCCGAGAAGGGGAAGCCGGTTACTGGGGCGTCCGACAATCTTCGCGAGTGGTGGAAGGATAAGGTCCGGTTTGATCGAAACGGTCCGGCTGCAATAGCCAAGTATCAAGCTGATAATGCTATCCCTGGGAAGAATGATGGATGCAATGCTATYGGTCCRACTCCACACACCTTGCAAGAGTTACAAGACACAACCTTGGGGTCTCTCTTGTCTGCACTTATGCAGCACTGTGATCCTCCTCAGAGGAGGTTCCCTCTAGAGAAGGGTGTTCCTCCGCCTTGGTGGCCGACCGGTAATGAAGAGTGGTGGCCTCAAATTGGTTTGCCTAAAGATCAAGGTCCTCCTCCTTACAAGAAGCCTCATGATCTTAAGAAGGCATGGAAGGTGGGTGTCCTAACTGCAGTTATCAAGCACATGTCTCCTGATATCGCCAAGATTCGCAAGCTCGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACAGCGAAGGAGAGCGCCACCTGGCTYGCCATCATCAATCAAGAGGAGGCCTTGGCTCGCGAGCTTTATCCTGATTATTGCCCACCTTTGTCTTCTGGTGGGGGAAGTGGATCTTTGGTCATCAATGATTGCACCGAGTATGAYGTCGATGGAGCCGAGAATGAGCCTAACTTCGACGTGGAAGACCGGAAACCGGAGAATCTTCATCCGTCTAATCTCGGCATGAGGGGAAGGCTGCAGGTTCAGAAACCTTCTCTTCCAATCAAGGGAGAGGTTGTAACAAACTTGGACTTCATTCGGAAGAGGAAGAGTGACTTTAACTTGATGGTGGATCAGAAAATCTACACATGTGAGCACCCTCAGTGCCCTTACAGCGAAGGCCGGCTCGGCTTCCAAGACCGGTCTTCGAGGGACAACCACCAACTCAACTGTCCATATAGAAACAACTCTGCTGCTGATTTCGCCGGTCCGAATTTCCATGTCAATGAGGTTAAGCCTGTTATATTCCCACAGTCCTTTGTTCAACCAAACACCACAGCTCAGCCTGCTAGTTTGGTTCCTCCAACATTCGACTTAACCGGACTCGGCGTCCCGGAGGACGGCCAGAAAATGATCAGTGACCTCATGTCAATCTATGATGCAAATGTTGTAGGAAACAAGAACACAAGCTCCAATAACTTTGTAGCTGAGAATCAAAATCAAAACATTCCTCAACAATGCATCAATCAACAACAGGAAAGTTTCTTTCCCAATCAAGGAATGGTGATGGAAGGGAACTTCTTTGCAAGGGATGATAATAATCAATTTGACAGGTTCAAAGCCATGAACACACCCTTTGAGACCACCACCACAGCCGCGGCCACCGCCGTCGCTGCCGCCACCAACCCCCCCAATAACAACAACAGCAACTTTAATTTTATGTTTGGATCCCCTTGTGATCTAGGATCATTTGATTTCAAGGAGGATCTACAAGGAGGAATGGGAATGGATTCACTTCACAAACAACCAGATGTTTCAATATGGTACCAGTGA 1869 0.4805 MMMFDDMGFCGDLDVLCGPLGESDMTARQTEPDAVVEDDYSDEEIDVDELERRMWRDKMRLKRLKEQSKAKEGIDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPLSSGGGSGSLVINDCTEYDVDGAENEPNFDVEDRKPENLHPSNLGMRGRLQVQKPSLPIKGEVVTNLDFIRKRKSDFNLMVDQKIYTCEHPQCPYSEGRLGFQDRSSRDNHQLNCPYRNNSAADFAGPNFHVNEVKPVIFPQSFVQPNTTAQPASLVPPTFDLTGLGVPEDGQKMISDLMSIYDANVVGNKNTSSNNFVAENQNQNIPQQCINQQQESFFPNQGMVMEGNFFARDDNNQFDRFKAMNTPFETTTTAAATAVAAATNPPNNNNSNFNFMFGSPCDLGSFDFKEDLQGGMGMDSLHKQPDVSIWYQ* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0409 622 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Amo07g0409 622 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 621 IPR006957 GO:0005634
Amo07g0409 622 MobiDBLite consensus disorder prediction 334 353 - -
Amo07g0409 622 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 1 621 - -
Amo07g0409 622 Coils Coil 47 67 - -
Amo07g0409 622 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Amo07g0409 622 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Amo07g0409 622 MobiDBLite consensus disorder prediction 64 91 - -
Amo07g0409 622 Pfam Ethylene insensitive 3 48 295 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0409 Amo-Chr7 3877613 3881134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0409 2 621 EIL Transcription Factor Family AT3G20770 62.712 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Amo07g0409 EIN3 2.3e-131 No_clan