Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3082 ATGATGAGTATCCACTCACAAAAATTCTCAACCTCAAGAACTTTGTACAATCTCTTATTGTTAATGTCCCTTCTTTCTATTATCCACACATCAGCACTACACAACACAAAAAACAAAGGCCACGGAAACAAAAGTGTTGCCAAATCAGTTCCAATTGTAGCAGCATCATCTCCAATTTCTCCACCTCTAGTGTTTGCAGATCAAAGGCTTCAATTAGTGTATCCAGTGATCCAAAAATTCAAGTCCACCGTAACCTTAGATCCCTTAGGAGTTACAAAAACTTGGGTAGGTTCAGATATTTGTAGCTACAAAGGTTTCTATTGTGACACTCCACCATACAATAGTTCAGCCGTTGCCTTAGCCTCAATTGATTTCAACGGTTTTCAACTTGTTGCACCTACCCTTGATGGATTCATAGATCAATTACCTGATATTGCTCTGTTCCATGCAAATACCAACAATTTTAGTGGAACAATCACACCCCAGATTTCAAAATTACCTTATCTTTATGAGCTTGATCTTAGTAACAATCAATTATCAGGTCCATTTCCTCTGGCTGTTCTGGGAATGGAAACGTTAACGTTTTTGGACATTAGGTTCAATTTGTTCTCTGGGGCAGTTCCACCACAGATTTTCACACAGAATCTTCAAGTTTTGTTCATCAACAACAACATATTTAATCAGAGTTTGCCTGATAACTTAGGATCCACTCATATTTTGTTGCTAACCTTAGCAAACAACAAGTTCAATGGTCCAATTCCAACAAGTCTTCCAAAGGCTTTAGCCACACTCACTGAAGTGTTGCTATTGAACAACCAGCTAACAGGTTGTTTGCCTTATGAGATTGGTTACCTTCAAGAGGCAACGGTTTTTGACGTTGGGAATAACCAATTGACAGGTCCGTTGCCATTGTCATTGAGTTGTCTTGAGAAGGTTGAGGTTCTGAATTTTGGTGGGAATTTGTTGTATGGTATGGTGCCTGAAGTTGTGTGTGCAAGTTTGATGGGCAATTTGGTAAATTTCTCACTTTCAGATAACTATTTCAATGCTGTGGGACCCATTTGTAGGGTTTTGATTGAGAGAGGAGTTCTTGATGTTACAAAGAATTGCATTCCTGATCTTCCATTCCAGAGATCAATTCTTGAGTGTGCTCAATTCTTTGCACAACCAAGGATGTGTCCATTGATGTGGTATCATAGTTTCATCCCTTGCAAGCTTCATTTTCATAACACTCCACTTTCTTCTATACCCTAG 1254 0.3892 MMSIHSQKFSTSRTLYNLLLLMSLLSIIHTSALHNTKNKGHGNKSVAKSVPIVAASSPISPPLVFADQRLQLVYPVIQKFKSTVTLDPLGVTKTWVGSDICSYKGFYCDTPPYNSSAVALASIDFNGFQLVAPTLDGFIDQLPDIALFHANTNNFSGTITPQISKLPYLYELDLSNNQLSGPFPLAVLGMETLTFLDIRFNLFSGAVPPQIFTQNLQVLFINNNIFNQSLPDNLGSTHILLLTLANNKFNGPIPTSLPKALATLTEVLLLNNQLTGCLPYEIGYLQEATVFDVGNNQLTGPLPLSLSCLEKVEVLNFGGNLLYGMVPEVVCASLMGNLVNFSLSDNYFNAVGPICRVLIERGVLDVTKNCIPDLPFQRSILECAQFFAQPRMCPLMWYHSFIPCKLHFHNTPLSSIP* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3082 417 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 414 - -
Amo06g3082 417 SUPERFAMILY L domain-like 86 371 - -
Amo06g3082 417 Gene3D Ribonuclease Inhibitor 75 237 IPR032675 -
Amo06g3082 417 PANTHER BNAA09G53810D PROTEIN 22 414 - -
Amo06g3082 417 Gene3D Ribonuclease Inhibitor 242 385 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3082 Amo-Chr6 97739197 97740529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g3082 59 390 Leucine-rich Repeat extension Gene Families AT3G24480 41.566 6.73e-85 266