Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3073 ATGGCACATCATCATCATCATCATGATTCTTTGTACTGCTCAGAACAACATTATTTTGATGACGAGGAACATGATCATGTGTTTCTAGAACAAGACATGTTGTGTGATGATTCAGAGTTGAAAACTCTTGTATCAAAAGAACAAGAACAAGAGAAGAATCTCAGCATTCTTTGCATTGATGAGTGGGAAAGAAGAGAAGCAGTGGAATGGATTCTTAGAGTGAATGCATATTTCTCATTCTCTGCTCTCACAGCTTCTCTTGCTGTTAACTACCTTCACAGATTCCTCTTCACCTTCACCATGAAGAAGAATCAGCCATGGTTGACTCATCTTGCTGCAGTTGCTTGCATCTCTCTTGCTGCTAAAATGGAAGAGACCCAAGTTCCTCTTCCTCTTGATTTACAAGTGGAGGACAGCAAATATGTGTTTGAGGCAAAAACAATAAAGAAAATGGAGATTTTGGTACTTTCAACTCTTGAGTGGAAGATGAATCCACCAACACCTCTCTCTTTCATTGATTACATCACAAGAAGACTTAAATGTTTTCACTTCCTCAACACATGTCAATCTCTTATTCTTTTTCTCTTACCAGATTCCAGGCTTATTGGCTATCTTCCTTCTGTGTTGGCAACTGCTACAATGATGCATGTAGTTAACAACAATGTGGAGCCTTATCTTGCATCTGAATACCAAAATCAGTTCTTGGGTATTCTTGAAATCAACAAGGAGAAGTTAGAAGAATGCTACAATCTCATATTGGAGGTTGTATCAGAGTCAGGATTCAACTACAAAGAATCCAAAAAACGCAATTTTGGATCAATTATTATTCCTAGTAGCCCAAGTGGTGTAATTGATGTGTCATTTAGCTTTGATCATCATGATAGCTCTAATGATTCATGGGAAGTAGTATCTGCTAATGATTCTGTTTCATCAACACCAAACAGCATCAACAAGAAGAGGCCTAGGACTCAAGAACACACTGCTTCCTTTGAACAATTCAAGCAATGA 1008 0.38 MAHHHHHHDSLYCSEQHYFDDEEHDHVFLEQDMLCDDSELKTLVSKEQEQEKNLSILCIDEWERREAVEWILRVNAYFSFSALTASLAVNYLHRFLFTFTMKKNQPWLTHLAAVACISLAAKMEETQVPLPLDLQVEDSKYVFEAKTIKKMEILVLSTLEWKMNPPTPLSFIDYITRRLKCFHFLNTCQSLILFLLPDSRLIGYLPSVLATATMMHVVNNNVEPYLASEYQNQFLGILEINKEKLEECYNLILEVVSESGFNYKESKKRNFGSIIIPSSPSGVIDVSFSFDHHDSSNDSWEVVSANDSVSSTPNSINKKRPRTQEHTASFEQFKQ* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3073 335 CDD CYCLIN 64 156 IPR013763 -
Amo06g3073 335 Pfam Cyclin, N-terminal domain 50 164 IPR006671 -
Amo06g3073 335 SMART cyclin_7 69 157 IPR013763 -
Amo06g3073 335 SUPERFAMILY Cyclin-like 36 164 IPR036915 -
Amo06g3073 335 Gene3D - 41 250 - -
Amo06g3073 335 Pfam Cyclin, C-terminal domain 166 264 IPR004367 -
Amo06g3073 335 MobiDBLite consensus disorder prediction 301 318 - -
Amo06g3073 335 PANTHER CYCLIN D3.1 PROTEIN 26 319 - -
Amo06g3073 335 SUPERFAMILY Cyclin-like 148 257 IPR036915 -
Amo06g3073 335 SMART Cyclin_C_2 166 279 IPR004367 -
Amo06g3073 335 PANTHER CYCLINS 26 319 IPR039361 -
Amo06g3073 335 Gene3D - 53 164 - -
Amo06g3073 335 MobiDBLite consensus disorder prediction 301 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3073 Amo-Chr6 97642277 97644480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g3073 9 270 Core Cell Cycle Gene Families AT4G34160 47.203 2.50e-84 258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g3073 06 97642277 97644480 Amo17g2839 17 130396177 130397526 PCT
Amo17g2839 17 130396177 130397526 Amo06g3073 06 97642277 97644480 PCT