Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0873 ATGTCAGTTATTGCCGTTGGATCATTCCTCCCGCCACCGCCGCCGTACCGGAGGATCAAGCCTCGCTTCACGACCATGGTGTCTCTCCGATCCGACGCTGTATCGGTTGCAGAAACAAGCAGCATATTGAGGAAGCTGAAGGAAGAGTGCGCCACGCCTCTTCCTGTACTTCGTCAAGTGGCGGATGCCATGTCAGCTGACATGAGAGCTGGCCTCGCCGCCGCACACGGCCTTCCCATGATACCCTCCTTCGTTGAGGATCTTCCCACTGGGAATGAGAAGGGATTGTTCTATGCTTTGGACCTTGGTGGAACCAACTTCCGTGTGCTGAGGGTGCAGTTGGGCGGAAAGGATGAGCGTGTCGTCGCCACCGACTTCGACCAAGTGTCCATACCTCCTCAGCTTATGTCTGCTACATGTGAGGAGCTTTTTGATTTCATTGCTTTAGGACTAGCAAAACTCGCAGCAAAAGATGATGGTAGATTCAATTTGTCGCCTGGAAAGAAGGGAGAAATCGGGTTCACTTTTTCATTTCCAGTGAGGCAGACATCTATTGACTCCGGCATACTAGTCAAGTGGACCAAAGGTTTTGCAGTCAGTGGAGCAGCAGGAAGAGATGTGGTTGCTTGTTTGAATGAGGCTATGGAGAGGCAAGGACTAGATATGCGAGTCTCTGCTCTGGTGAATGATGCTGTGGCAACATTAGCTGGAGCAGAATATTGGGACAATGATGTTGCAGTTGCTATCATTTTAGGTACCGGAACCAATGCCTGCTATGTTGAGCAAATTGATGCCATTCCTAAGTTACAAGGTCATGTCTCCTCTTCTGGGAAAATGATTATTAGTACAGAGTGGGGAGCATTCTCAAAACGTCTCCCTTTAACCGAGTTTGATAGAGCGATGGATGCTGCTAGTATCAACCCTGGTGAGCAGATCTTTGAAAAGACAATCTCAGGAATGTATCTAGGGGAAATTGTGAGACTAGTGCTTCTGGAAATGGCTGCAACTGGTGAATTGTTTGGGAAATCAATCCCAGAAAATTTATATACGCCTTTCATACTTGGGACCCCAGATCTATGTGCCATGCAGCAGGACAAGTCAGGTGATTTACAAGGCGTTGGGTCCCTCCTCTATGATAAAGCAAGGGTTGAGTCCACTTTTAGTGCAAGGAAAACCGTTTTAGAGGTTTGTGACACAATTGTGAAGCGGGGTGGAAGCTTAGCAGGTGCAGGAATTGTGGCGATTCTGCAAAAAATGGAGGAGGATTCAAAAGGAGTGATCTTTGGAAAGAGAACAGTTGTGGCCATTGATGGAGGCTTATATGAAAATTATCCTCAATACAGGACATATATGCAAGATTCGGTCAAAGAGCTCATAGGATCAGAGAAGTCAAACAATTTGGTAATTGAACATTCAAAAGATGGATCTGGCATAGGTGCTGCTCTTTTGGCAGCTACAAACTCCATGTACAAGCATGACTTCTAG 1485 0.4694 MSVIAVGSFLPPPPPYRRIKPRFTTMVSLRSDAVSVAETSSILRKLKEECATPLPVLRQVADAMSADMRAGLAAAHGLPMIPSFVEDLPTGNEKGLFYALDLGGTNFRVLRVQLGGKDERVVATDFDQVSIPPQLMSATCEELFDFIALGLAKLAAKDDGRFNLSPGKKGEIGFTFSFPVRQTSIDSGILVKWTKGFAVSGAAGRDVVACLNEAMERQGLDMRVSALVNDAVATLAGAEYWDNDVAVAIILGTGTNACYVEQIDAIPKLQGHVSSSGKMIISTEWGAFSKRLPLTEFDRAMDAASINPGEQIFEKTISGMYLGEIVRLVLLEMAATGELFGKSIPENLYTPFILGTPDLCAMQQDKSGDLQGVGSLLYDKARVESTFSARKTVLEVCDTIVKRGGSLAGAGIVAILQKMEEDSKGVIFGKRTVVAIDGGLYENYPQYRTYMQDSVKELIGSEKSNNLVIEHSKDGSGIGAALLAATNSMYKHDF* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0873 494 Pfam Hexokinase 247 485 IPR022673 GO:0005524|GO:0005975|GO:0016773
Amo06g0873 494 ProSiteProfiles Hexokinase domain profile. 37 485 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Amo06g0873 494 PANTHER HEXOKINASE-LIKE 1 PROTEIN-RELATED 29 490 - -
Amo06g0873 494 ProSitePatterns Hexokinase domain signature. 172 197 IPR019807 GO:0004396|GO:0005524|GO:0006096
Amo06g0873 494 Gene3D - 63 473 - -
Amo06g0873 494 Pfam Hexokinase 43 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Amo06g0873 494 SUPERFAMILY Actin-like ATPase domain 244 488 IPR043129 -
Amo06g0873 494 CDD NBD_sugar-kinase_HSP70_actin 99 261 - -
Amo06g0873 494 PRINTS Hexokinase family signature 224 240 - -
Amo06g0873 494 PRINTS Hexokinase family signature 311 333 - -
Amo06g0873 494 PRINTS Hexokinase family signature 247 261 - -
Amo06g0873 494 PRINTS Hexokinase family signature 470 486 - -
Amo06g0873 494 PRINTS Hexokinase family signature 393 415 - -
Amo06g0873 494 PRINTS Hexokinase family signature 172 197 - -
Amo06g0873 494 PRINTS Hexokinase family signature 98 114 - -
Amo06g0873 494 Gene3D - 83 484 - -
Amo06g0873 494 PANTHER HEXOKINASE 29 490 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Amo06g0873 494 SUPERFAMILY Actin-like ATPase domain 36 242 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0873 Amo-Chr6 11952421 11956043 Transposed