Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0856 ATGATTGTTGCAGATGGAATCGACGATGAAGAGAAGTGGCTGGCGGAGGGCATCGCCGGCGTTCAACATCACGCTTTCTTCATGCACCGCGCCCTCGACGACAACAATCTCAGGGACGCTTTAAAATACTCCTCGCTAATGCTTTCCGAGCTTCGAACTTCGAGGCTCTCCCCTCACAAATACTATGAACTGTATATGAGAGCGTTCGACGAGCTTAGGAGGTTGGAATTGTTCTTCAAAGACGAGAGCAGGCATGGCGTTTCCATTTTTGATCTCTACGAGCTTGTTCAGCACGCTGGAAATGTATTGCCTAGATTGTATCTCCTTTGCACAGTGGGGTCGGTGTACCTCAGGTGTAAGGATGCTCCTGTGAAGGATGTTCTTAAGGATCTGGTGGAAATGTGTCGTGCGGTTCAGCACCCAATTCGCGGCCTGTTTTTGAGGAGTTACCTTGCTCAAATCAGCAAGGATAAGTTACCCGATATTGGCTCTGAATATGATGGAGAAGGGGATTCGGGCAATGTCATGGATGCTGTTGAATTTATCCTACAAAATTTCATGGAAATGAATAAGCTTTGGGTTCGATTGCAACATCAGGGACCTGGTCGGATAAGAGACAAGAGGGAGAAAGAAAGAAATGAGCTTCGCGATCTTGTTGGAAAGAATCTTCACATTCTCAGTCAGATAGAGGGTGTGGACCTTGAAATGTACAAAGACACTGTCCTTCCGAGTGTCTTAGAGCAGGTTGTCAATTGTAAAGATGAGCTTGCCCAATTTTACCTCATGGAGTGCATAATCCAAGTTTTCCCAGATGAGTACCACTTGCAGACTCTTGAGACACTTCTTGGTGCTTACCCCCAACTGCAGTCAACAGTAGACATCAAGACCATACTATCTCAGTTAATGGACAGGTTATCAAATTATGCTGCTTCAAATGCTGAAGTGCTGCCCGAATTTCTGCAAGTGGAAGCTTTTACCAAACTAAGCACAGCAATAGGCAGGGTGATAGAAGCACAGGCTGACATACCTATTGTTGGAGCAATATCTTTGCATGTCTCTCTTCTGACATTCACTCTCCGTGTTCATCCTGATCGGCTTGATTATGTGGACCAAGTGCTGGGATCATGTGTCAAGAAGCTTTCTGGAAAACCAAAGCTTGATAATAGAGCAACGAAGCAAGTTGTTGCACTTTTAAGTGCTCCACTGGATAAATACAATGATATTGTGACAGCCCTTAGACTTTCTAATTATCCGCGTGTAATGGATCATCTTGATAACCAAACAAATAAAGTGATGGCTATGCTTATTATCCAAAGTATTATGAAGAATAACACTCTCATATCTACTGCTGATAAGGTTGAAGTTTTATTTGAATTAATAAAAGGGCTTATTACAGATTTGGATGCCACAACTGTGGATGAGGTTGATGAAGAAGATTTCAGCGAAGAACAAAATTCTGTTGCTCGGCTCATACACATGCTTCATAACAATGATCCAGAGGAAATGTTTAAGATAATATGTAGTGTAAAGAAGCACATTATGAGAGGAGGACCAAGGCGTTTACCTTTCACAGTTCCTTCCCTTATTTTTTCTGCACTTAGGTTGGTCAGGCAATTACAAGGACAAGATGGAGATGTTGTGGGTGAAGAAGTTCCAACGACACCAAAAAAGATATTTCAGCTTTTAAATGAGATCATTGAAGCCCTTTCTTCTGTATCATCTCCCGAACTGGCCTTGAGATTGTACCTGCAATGTGCTGAGGCTGCTAATGACTGTGACCTTGAGCCTGTTGCATATGAGTTTTTCACCGAAGCATTTGTGTTATATGAAGAAGAAATTGCGGACTCTAAAGCCCAGGTAACTGCAATACATCTTATTATTGGGACACTTCAGAGGATGAACGTCTTTGGAGTCGAGAACAGGGATACGTTAACTCATAAGGCCACAGGGTATTCGGCAAAGCTTTTGAAGAAACCTGATCAGTGCCGAGCAGTTTATGCGTGCTCACATCTCTTCTGGGTCGATGATCAAGATGGTATTAAAGATGGAGAGAGGGTATTGCTTTGCCTTAAGCGTGCATTGAGGATCGCAAATGCTGCGCAGCAAATGGCCAATGTAGCAAGGGGTAGCAGTGGTCCAGTAACGCTATTTGTTGAAATACTAAACAAGTACATATACTATTTTGAGAAAGGAAACCCACAAATCACAAGTGCAACGATTCAGGGGCTGATAGAATTAATCACAACCGAGATACAAGGTGATTCTACATCTGCTCTTCCAACTTCGGATCCCTTCTTTACAAGCACATTGCGGTACATACAATTCCAAAAGCAGAAAGGTGGTATACTGGGTGAGAAATATGAATCTATCAAGGTCTGA 2379 0.4288 MIVADGIDDEEKWLAEGIAGVQHHAFFMHRALDDNNLRDALKYSSLMLSELRTSRLSPHKYYELYMRAFDELRRLELFFKDESRHGVSIFDLYELVQHAGNVLPRLYLLCTVGSVYLRCKDAPVKDVLKDLVEMCRAVQHPIRGLFLRSYLAQISKDKLPDIGSEYDGEGDSGNVMDAVEFILQNFMEMNKLWVRLQHQGPGRIRDKREKERNELRDLVGKNLHILSQIEGVDLEMYKDTVLPSVLEQVVNCKDELAQFYLMECIIQVFPDEYHLQTLETLLGAYPQLQSTVDIKTILSQLMDRLSNYAASNAEVLPEFLQVEAFTKLSTAIGRVIEAQADIPIVGAISLHVSLLTFTLRVHPDRLDYVDQVLGSCVKKLSGKPKLDNRATKQVVALLSAPLDKYNDIVTALRLSNYPRVMDHLDNQTNKVMAMLIIQSIMKNNTLISTADKVEVLFELIKGLITDLDATTVDEVDEEDFSEEQNSVARLIHMLHNNDPEEMFKIICSVKKHIMRGGPRRLPFTVPSLIFSALRLVRQLQGQDGDVVGEEVPTTPKKIFQLLNEIIEALSSVSSPELALRLYLQCAEAANDCDLEPVAYEFFTEAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVTLFVEILNKYIYYFEKGNPQITSATIQGLIELITTEIQGDSTSALPTSDPFFTSTLRYIQFQKQKGGILGEKYESIKV* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0856 792 PIRSF Retromer_Vps35 3 792 IPR005378 GO:0015031|GO:0030906|GO:0042147
Amo06g0856 792 PANTHER VACUOLAR SORTING PROTEIN 35 3 792 IPR005378 GO:0015031|GO:0030906|GO:0042147
Amo06g0856 792 Pfam Vacuolar protein sorting-associated protein 35 13 749 IPR005378 GO:0015031|GO:0030906|GO:0042147
Amo06g0856 792 Gene3D - 468 777 IPR042491 -
Amo06g0856 792 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 3 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0856 Amo-Chr6 11815591 11821440 Dispersed/Wgd