Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0824 ATGATGTCGTGCAAAGCGGAAGTAAAGGAGAAAATGAACTCTGCAGCAAAACCTAACCGCAGGAATGGCAATCATCTCCCGAAGAATGTGTACCACATCGGAGGCCTGCAGGTGGAGTTTCCGTACCAACCGTACGGGTCCCAGTTTGCATTCATGGGGAGAGTGATCTCCACCCTCGACCGGGCTCAGAGGGAAGGCCACTGCCACGCCTTGCTCGAGTCTCCAACTGGCACCGGCAAGTCCCTCTCCCTCCTCTGTTCCTCTCTCGCCTGGCAGCACCGTTACAAATCCCAACCCAAGCCCCCTCCGCCTTCCGAGCCCCTTGCCGATCCTCTCGTCCACGGCGGCGGCTTTCTTCCCGAGGATGATGCCTTTTCTTCTCCATCCGATAATCCGGAGCTCGCAGAAGCCGAACCAGCCAAAAAAAATCAGAAGAAAAAGGCCGCTCCTACTATATATTATGCCTCGAGAACTCACTCACAAATCTCTCAAGTCATTCGTGAACTGCGGAAAACTACATACAGGGTGCCGATGGCTGTATTGGCATCACGGAAACATTACTGCACWAATAAAAATATACTTGGCAAAGAGAACATCAATGAAGAATGTAAACTACTTCTGAAAGACCAGGAGATAGGGTGTCCAGAATTCAAAAATGCACATAAAGTCAAAGGACATCCCTCTCTTCAGAAAGGAGGATGTAATGAGGTGCATGACATAGAAGATCTTATAAAAGTTGGACATTCAGTGAAAGGTTGCTCCTATTATGCTGCACGTAATATGTCAGATGATGCGCAGCTGGTATTTTGTCCTTATAGCTACATCATTAATCCTGTCATTCGGGGAGCAATGGACTTAGATATTAAAGGAGCTATACTGATTCTTGATGAAGCTCACAATATAGAGGACATCACTCGAGATGCTGGCAGCGTGGATATTCAAGAGGATGATTTTGATAAACTGCAAATGGAGCTWCAGCAACTATGTTCTGTAAATGCTGCAATATACCAACCACTATATGAAATGGCACAGGGTCTTACTAGTTGGATAGAACGGAAGAAAAATAACCTAGACAAGCGTGATTTTCAGCACTATGTGTCATGTTGGACTGGTGACAAGGCATTGAGAGAACTTGAAGAAGCAAATATKTCAAAACAGTGCTTCCCAATCTTACTAGAATGTGCTACTAAGGCAATCAGAATTGCTACGGACTTGGAGACAGATAAGCCACATTTAAGTGGCATGTCAGTGATAACATTGGAAGGTTTATTCTCATCACTAACTTATTTCTTCTCAAGAAACGGATCTCACATGTTGGATTACCAGCTTGCTCTGCAGCGATGTGTTAGAAAAGATGCTGTAAGAGCTTTTGGAAACTGGACACACACTTTCAGCTTGTGGTGCTTGAATCCAGCTGTTGTGTTTAGAGATGTTGCTGATCTTTCTTTATCGATTATCTTGACTTCTGGGACTCTATCGCCGATGAGTTCCTTTTCTTCTGAGCTTGGAGTTCAGTTTGAAACTAATCTTGAAGCCCCCCATGTAATTGACATTTGCACACAGGTGTGGCCTGCTGTAATCTCCACTGGTCCTGGTAATTATCCTTTGAATGCAAGTTATAAAACGGCAGATGGATATGCCTTTCAGGATGCAGTTGGAAGATCTTTAGAAGAAATCTTCAACATTGTTCCAGGTGGATGTCTTGTGTTCTTCCCAAGTTATAAATTGATGGAGAAATTATGCAACCGTTGGACTGAAACAGGTCAATGGTCTCGACTAAATGCAAAAAAGCCCCTTTATGTTGAACCACGAGCTGGAGGCCAAGATGATTTTGAGACTACCTTAAAAGGGTATTATGACTCGATTCATCATGGGAAAAAGCRTGGTGCGCGAAGGAAAAGAAGGATTAAAGAAGTTGATTCAAATCACTCCCATCCGGTTGATTCCCAAGAGGGTTTTGAGAAAGGAGGAGCTGCTTTACTTGGTGTTTGCCGTGGAAAGGTTTCCGAAGGGATTGATTTCTCTGATGATAATGCCAGAGTAGTTATTATTGTTGGTATTCCATTTCCCAACATAAATGATATTCAAGTTTCTCTAAAGAAAAAATATAATGATATGTACAAATCATCCAAAAATCTTCTCAGCGGAAGTGAGTGGTATTGTCACCAAGCATTCCGTGCTTTAAATCAAGCAGCAGGWCGTTGTATACGACATAAGCTTGACTATGGGGCAATAATCCTTTTGGATGAACGTCTTCGTGAAGAAAGAAGTAGAGCATTCATTTCGAAGTGGCTAAGAAGAAACCTAAAGGTTTATGACAACTTCGAATTATCAATAGAAGGACTAAAATCATTCTTTGAGGATGCCAAGGAATGGCATGCAATGAATACAGTGAATGTCAAACAGAATTTGAGCTTACATACRGATGGTGTCAATATCAAGYGTCAGAATAAGAGATTCACAAGAAAGAAAAATCAGAAACTTAACAAATCTTGCAATGGATTTGAGAAAGAAGGGTCAATTATTGAGGACCATGGCTCTTTTCCTGTACTAAGCTGTCAAGATCTTGTTGACAGTCAACCATCAGCTCAAGGGAATAGTAACAAATACAATTGTGAAGACCATATAAACCCACAAATCTGTAATCTGACGGAGGAAAGGTTCAATCGGGARTTATTTGTTGCATCCACGCTTGGAGAATGCTCCTCCATCAAGGAAACCCCTTGTATAGATGTTAACAGTGATCCAGGTAGCCCTGGTTTCTCTAAGGATGATAACTCTGTTTCCACCATAATTGAGGCCTCTGCTCAATTTTCAAATCACTTYTCAAGCMTATCAMTGTGTTTACCTGATGGAAAAATATTTCCTGAAACGGAATCACCTGTGAATACAAGTGTTAATTCTCACTACCAGAAAAGGAGGAAGACCATGCTCTCACCATTTATCACAGAGGTAGAAAATTTAAATTATATTACACCTTGTGCCAACACTCTTATGACATACACAAAAAGCTCGTTGGATGTTAGAGAGGAAGCTCATGGAATTGAACATGTTTGGGAGAGAAATTCGAAGTCAAATATTCCTGAGTTACCAACAAGTAGTCTACCTAGTTCATGTTCGTTAACTTTCCCTTTACGGGATAGAAGGTTACAACTTTTTTGTTTACTCTGCAAAAACCCATTGGGCCGACCTGAAAACAATCTGTATCTCACGTGTTCCTTGATTTCCTCATCAAAAGTCCACTTAAGAACCCTTTTGAAACAGAGAACGAAAGCTTATGCTACTGAGACATCAAATAGTATACCCGTTATTCTAACCGATTCTTCATTTGTTGATCAACGTATCCTCACTGGCAGTGCACTGGAACAGGGTATTTGGTGTGTGGAAGATGGGTGTGTCTTCAGCTCTGTTCTCTGCCCCTTCTGCAGTGACCGCAACAATTTACTAGGAGTTCAGATCATTGCAACTAATTCATCAAATATTCAGTTACTTGAAAAGATACTGTTTTACTATGATTCTTTAGAGGTGAAGAGCTATGAGGAATCAGCGTCTGGTGTTTCCAAGGATGTGGATTTGAAGCCAGTTAATGTGAATGATCGAGGCATGAATGGAACTGCTGTCTTAAGTTCCATCGACAAGTATTCGTATGTTCCCCGGCCAAAGATTTCAGAACAGAAACTAAGGGGCTTGCCTTCTGAGGAAAACCAAAGTTGA 3714 0.4168 MMSCKAEVKEKMNSAAKPNRRNGNHLPKNVYHIGGLQVEFPYQPYGSQFAFMGRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSLAWQHRYKSQPKPPPPSEPLADPLVHGGGFLPEDDAFSSPSDNPELAEAEPAKKNQKKKAAPTIYYASRTHSQISQVIRELRKTTYRVPMAVLASRKHYCTNKNILGKENINEECKLLLKDQEIGCPEFKNAHKVKGHPSLQKGGCNEVHDIEDLIKVGHSVKGCSYYAARNMSDDAQLVFCPYSYIINPVIRGAMDLDIKGAILILDEAHNIEDITRDAGSVDIQEDDFDKLQMELQQLCSVNAAIYQPLYEMAQGLTSWIERKKNNLDKRDFQHYVSCWTGDKALRELEEANXSKQCFPILLECATKAIRIATDLETDKPHLSGMSVITLEGLFSSLTYFFSRNGSHMLDYQLALQRCVRKDAVRAFGNWTHTFSLWCLNPAVVFRDVADLSLSIILTSGTLSPMSSFSSELGVQFETNLEAPHVIDICTQVWPAVISTGPGNYPLNASYKTADGYAFQDAVGRSLEEIFNIVPGGCLVFFPSYKLMEKLCNRWTETGQWSRLNAKKPLYVEPRAGGQDDFETTLKGYYDSIHHGKKXGARRKRRIKEVDSNHSHPVDSQEGFEKGGAALLGVCRGKVSEGIDFSDDNARVVIIVGIPFPNINDIQVSLKKKYNDMYKSSKNLLSGSEWYCHQAFRALNQAAGRCIRHKLDYGAIILLDERLREERSRAFISKWLRRNLKVYDNFELSIEGLKSFFEDAKEWHAMNTVNVKQNLSLHTDGVNIKXQNKRFTRKKNQKLNKSCNGFEKEGSIIEDHGSFPVLSCQDLVDSQPSAQGNSNKYNCEDHINPQICNLTEERFNRELFVASTLGECSSIKETPCIDVNSDPGSPGFSKDDNSVSTIIEASAQFSNHFSSXSXCLPDGKIFPETESPVNTSVNSHYQKRRKTMLSPFITEVENLNYITPCANTLMTYTKSSLDVREEAHGIEHVWERNSKSNIPELPTSSLPSSCSLTFPLRDRRLQLFCLLCKNPLGRPENNLYLTCSLISSSKVHLRTLLKQRTKAYATETSNSIPVILTDSSFVDQRILTGSALEQGIWCVEDGCVFSSVLCPFCSDRNNLLGVQIIATNSSNIQLLEKILFYYDSLEVKSYEESASGVSKDVDLKPVNVNDRGMNGTAVLSSIDKYSYVPRPKISEQKLRGLPSEENQS* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0824 1237 MobiDBLite consensus disorder prediction 95 152 - -
Amo06g0824 1237 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 34 368 IPR014013 GO:0005524
Amo06g0824 1237 MobiDBLite consensus disorder prediction 9 28 - -
Amo06g0824 1237 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 291 300 IPR002464 -
Amo06g0824 1237 SMART deadxpd 36 360 IPR006554 GO:0003678|GO:0016818
Amo06g0824 1237 Gene3D - 44 354 IPR027417 -
Amo06g0824 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 748 IPR027417 -
Amo06g0824 1237 SMART Cxpdneu3 574 754 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Amo06g0824 1237 Pfam DEAD_2 154 317 IPR010614 GO:0003677|GO:0003678|GO:0005524
Amo06g0824 1237 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 27 1098 IPR045028 -
Amo06g0824 1237 Gene3D - 533 779 IPR027417 -
Amo06g0824 1237 Pfam Helicase C-terminal domain 556 767 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Amo06g0824 1237 PANTHER FANCONI ANEMIA GROUP J PROTEIN 27 1098 - -
Amo06g0824 1237 CDD SF2_C_XPD 521 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0824 Amo-Chr6 11555860 11565440 Dispersed/Wgd